RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 YY2O15391 372 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 CREG1O75629 220 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 MYO1DO94832 1006 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 MATN4O95460 622 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 H6PDO95479 791 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 CHRM5P08912 532 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-215ENST00000552823 TFPTP0C1Z6 253 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 EBLN1P0CF75 366 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 C6P13671 934 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 RFC2P35250 354 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 SLC19A1P41440 591 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 STT3AP46977 705 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 ESRRGP62508 458 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 BNIP2Q12982 314 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 MTA1Q13330 715 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 CAMK1Q14012 370 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 PDCD4Q53EL6 469 aaKnown RBP5.42□□□□□ -1.54
LIMA1-215ENST00000552823 ZNF805Q5CZA5 627 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.42□□□□□ -1.54
LIMA1-215ENST00000552823 ACBD5Q5T8D3 534 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-215ENST00000552823 TNFAIP8L2Q6P589 184 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-215ENST00000552823 XKR5Q6UX68 686 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 MACC1Q6ZN28 852 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 UTS2BQ765I0 119 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 DGLUCYQ7Z3D6 616 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 GALNT7Q86SF2 657 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 MSRB3Q8IXL7 192 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 YAF2Q8IY57 180 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 PDPRQ8NCN5 879 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 HUS1BQ8NHY5 278 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 CNIH3Q8TBE1 160 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 RNF217Q8TC41 542 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 FGF13Q92913 245 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 RAB8BQ92930 207 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 RELTQ969Z4 430 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 PRAP1Q96NZ9 151 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 LGR4Q9BXB1 951 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 TOR3AQ9H497 397 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 SMPD3Q9NY59 655 aaPredicted RBP5.42□□□□□ -1.54
LIMA1-215ENST00000552823 RIMKLBQ9ULI2 386 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 HS3ST2Q9Y278 367 aa5.42□□□□□ -1.54
LIMA1-215ENST00000552823 ASXL3Q9C0F0 2248 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 REV3LO60673 3130 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 A0A1W2PP55 124 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 A0A1W2PPW3 197 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 AQP12BA6NM10 295 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ATG13O75143 517 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 PRKRAO75569 313 aaKnown RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 EPHA2P29317 976 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 PRIM2P49643 509 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 GALK1P51570 392 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 CLCNKAP51800 687 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 PRMT2P55345 433 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 PFN3P60673 137 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 CAMK2GQ13555 558 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 MAP7Q14244 749 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ZNF234Q14588 700 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 GANABQ14697 944 aaKnown RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 OGFOD2Q6N063 350 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 GPR141Q7Z602 305 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 CHERPQ8IWX8 916 aaKnown RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 AQP12AQ8IXF9 295 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 CACTIN-AS1Q8N1I8 211 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 TMEM132CQ8N3T6 1108 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 BTN2A2Q8WVV5 523 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 UCN3Q969E3 161 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ARSGQ96EG1 525 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 OR4K3Q96R72 315 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 RHNO1Q9BSD3 238 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 EPS8L2Q9H6S3 715 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 AASDHPPTQ9NRN7 309 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ZDHHC7Q9NXF8 308 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 KIF17Q9P2E2 1029 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ATXN10Q9UBB4 475 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 VPS29Q9UBQ0 182 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 TAC3Q9UHF0 121 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 RAB23Q9ULC3 237 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ERVK-11Q9UQG0 969 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 GPSM3Q9Y4H4 160 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 KCNE2Q9Y6J6 123 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 FAM186AA6NE01 2351 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 NCOR1O75376 2440 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 TDRD6O60522 2096 aaKnown RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 KNTC1P50748 2209 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 OR52A4PA6NMU1 304 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 VILLO15195 856 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 MID1O15344 667 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 DENRO43583 198 aaKnown RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 KLK8O60259 260 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ERAL1O75616 437 aaKnown RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 C6orf47O95873 294 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 OLFM2O95897 454 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ENO2P09104 434 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 C8orf89P0DMQ9 161 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 PIM1P11309 404 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 CDH1P12830 882 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ETFAP13804 333 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 HSD17B1P14061 328 aa5.41□□□□□ -1.54
LIMA1-215ENST00000552823 ZNF8P17098 575 aaPredicted RBP5.41□□□□□ -1.54
LIMA1-215ENST00000552823 GDI1P31150 447 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms