RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 YIPF2Q9BWQ6 316 aa12.63□□□□□ -0.39
SNRPF-203ENST00000551316 VN1R1Q9GZP7 353 aa12.63□□□□□ -0.39
SNRPF-203ENST00000551316 UBP1Q9NZI7 540 aa12.63□□□□□ -0.39
SNRPF-203ENST00000551316 IL1RAPL1Q9NZN1 696 aa12.63□□□□□ -0.39
SNRPF-203ENST00000551316 ZC3H7BQ9UGR2 993 aaKnown RBP12.63□□□□□ -0.39
SNRPF-203ENST00000551316 NPFFR2Q9Y5X5 522 aa12.63□□□□□ -0.39
SNRPF-203ENST00000551316 HEATR5BQ9P2D3 2071 aa12.63□□□□□ -0.39
SNRPF-203ENST00000551316 IFRD1O00458 451 aaPredicted RBP12.62□□□□□ -0.39
SNRPF-203ENST00000551316 C8orf89P0DMQ9 161 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 CCNCP24863 283 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 PSMB5P28074 263 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 PKLRP30613 574 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 PAFAH1B3Q15102 231 aaKnown RBP12.62□□□□□ -0.39
SNRPF-203ENST00000551316 IFI16Q16666 785 aaKnown RBP12.62□□□□□ -0.39
SNRPF-203ENST00000551316 TCTE1Q5JU00 501 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 PRMT9Q6P2P2 845 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 POMZP3Q6PJE2 187 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 FIGLAQ6QHK4 219 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 DTX3LQ8TDB6 740 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 DENND1AQ8TEH3 1009 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 RNASE6Q93091 150 aaKnown RBP12.62□□□□□ -0.39
SNRPF-203ENST00000551316 PIP5K1AQ99755 562 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 SARGQ9BW04 601 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 XPO4Q9C0E2 1151 aaKnown RBP12.62□□□□□ -0.39
SNRPF-203ENST00000551316 C14orf105Q9NVL8 296 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 OR6C2Q9NZP2 312 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 SCN3AQ9NY46 2000 aa12.62□□□□□ -0.39
SNRPF-203ENST00000551316 A0A0G2JMM0 328 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 A0A0J9YVX5 310 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 A0A1W2PPB8 328 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 A0A1W2PRS3 328 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 KRT87PA6NCN2 255 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 FAM166BA8MTA8 275 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 KIR3DP1A8MWS1 328 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 SIAH2O43255 324 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 DNAJB6O75190 326 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 SUN1O94901 812 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 NDST3O95803 873 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 ICAM2P13598 275 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 ACADLP28330 430 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 CD151P48509 253 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 ASCL1P50553 236 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 POLR2FP61218 127 aaKnown RBP12.61□□□□□ -0.39
SNRPF-203ENST00000551316 ITGA9Q13797 1035 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 CPEB2Q7Z5Q1 589 aaKnown RBP12.61□□□□□ -0.39
SNRPF-203ENST00000551316 CPNE8Q86YQ8 564 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 RNF25Q96BH1 459 aaPredicted RBP12.61□□□□□ -0.39
SNRPF-203ENST00000551316 ZFYVE21Q9BQ24 234 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 CDCP1Q9H5V8 836 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 FAM96AQ9H5X1 160 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 DEPPQ9NTK1 212 aa12.61□□□□□ -0.39
SNRPF-203ENST00000551316 A0A0U1RQJ8 604 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 TUBAL3A6NHL2 446 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 ARHGEF33A8MVX0 844 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 TMCO5BA8MYB1 307 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 RNF8O76064 485 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 SOX30O94993 753 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 EIF2S1P05198 315 aaKnown RBP12.6□□□□□ -0.39
SNRPF-203ENST00000551316 PRSS56P0CW18 603 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 PRKCSHP14314 528 aaPredicted RBP12.6□□□□□ -0.39
SNRPF-203ENST00000551316 BMP5P22003 454 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 SLC26A3P40879 764 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 AP2B1P63010 937 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 SLC25A11Q02978 314 aaKnown RBP12.6□□□□□ -0.39
SNRPF-203ENST00000551316 TNK1Q13470 666 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 PRTGQ2VWP7 1150 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 FAM214AQ32MH5 1076 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 FBXL19-AS1Q494R0 122 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 PAQR7Q86WK9 346 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 ARHGEF39Q8N4T4 335 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 ZFP62Q8NB50 900 aaPredicted RBP12.6□□□□□ -0.39
SNRPF-203ENST00000551316 ZNF398Q8TD17 642 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 CCDC34Q96HJ3 373 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 TGIF2Q9GZN2 237 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 FKBPLQ9UIM3 349 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 ASF1AQ9Y294 204 aa12.6□□□□□ -0.39
SNRPF-203ENST00000551316 FOXS1O43638 330 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 PEX1O43933 1283 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 PTH2RP49190 550 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 IFI35P80217 286 aaPredicted RBP12.59□□□□□ -0.39
SNRPF-203ENST00000551316 GRB7Q14451 532 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 HKDC1Q2TB90 917 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 SIRPB2Q5JXA9 342 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 CATSPEREQ5SY80 951 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 MDGA2Q7Z553 956 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 ANKRD37Q7Z713 158 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 SLC13A5Q86YT5 568 aaPredicted RBP12.59□□□□□ -0.39
SNRPF-203ENST00000551316 LRRC49Q8IUZ0 686 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 SLC25A41Q8N5S1 370 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 POGLUT1Q8NBL1 392 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 BLOC1S5Q8TDH9 187 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 SMC6Q96SB8 1091 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 PIGQQ9BRB3 760 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 YIPF4Q9BSR8 244 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 SGPP1Q9BX95 441 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 YAE1D1Q9NRH1 226 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 RWDD2AQ9UIY3 292 aa12.59□□□□□ -0.39
SNRPF-203ENST00000551316 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms