RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 PRAMEF13Q5VWM6 474 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 TSPEARQ8WU66 669 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SLC5A11Q8WWX8 675 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 GFM2Q969S9 779 aaKnown RBP19.01■□□□□ 0.63
SSH1-209ENST00000551165 TOE1Q96GM8 510 aaKnown RBP19.01■□□□□ 0.63
SSH1-209ENST00000551165 DPY30Q9C005 99 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 ASIC5Q9NY37 505 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 TAC3Q9UHF0 121 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SLCO1B1Q9Y6L6 691 aa19.01■□□□□ 0.63
SSH1-209ENST00000551165 SERTM1A2A2V5 107 aa19■□□□□ 0.63
SSH1-209ENST00000551165 PDZK1P1A8MUH7 402 aa19■□□□□ 0.63
SSH1-209ENST00000551165 MAN2B1O00754 1011 aa19■□□□□ 0.63
SSH1-209ENST00000551165 LRATO95237 230 aa19■□□□□ 0.63
SSH1-209ENST00000551165 LMNAP02545 664 aaKnown RBP19■□□□□ 0.63
SSH1-209ENST00000551165 NXPE4Q6UWF7 544 aa19■□□□□ 0.63
SSH1-209ENST00000551165 KIAA2013Q8IYS2 634 aa19■□□□□ 0.63
SSH1-209ENST00000551165 TMEM74Q96NL1 305 aa19■□□□□ 0.63
SSH1-209ENST00000551165 TPSD1Q9BZJ3 242 aa19■□□□□ 0.63
SSH1-209ENST00000551165 POLMQ9NP87 494 aaPredicted RBP19■□□□□ 0.63
SSH1-209ENST00000551165 TBC1D29Q9UFV1 150 aa19■□□□□ 0.63
SSH1-209ENST00000551165 LEF1Q9UJU2 399 aaPredicted RBP19■□□□□ 0.63
SSH1-209ENST00000551165 A0A1W2PPV9 198 aa19■□□□□ 0.63
SSH1-209ENST00000551165 C10orf142B7Z368 130 aa19■□□□□ 0.63
SSH1-209ENST00000551165 ANP32DO95626 131 aa19■□□□□ 0.63
SSH1-209ENST00000551165 PTDSS1P48651 473 aaKnown RBP19■□□□□ 0.63
SSH1-209ENST00000551165 PXNP49023 591 aaPredicted RBP19■□□□□ 0.63
SSH1-209ENST00000551165 KIAA1024LP59773 190 aa19■□□□□ 0.63
SSH1-209ENST00000551165 RPS13P62277 151 aaKnown RBP19■□□□□ 0.63
SSH1-209ENST00000551165 PHC1P78364 1004 aa19■□□□□ 0.63
SSH1-209ENST00000551165 FLOT2Q14254 428 aa19■□□□□ 0.63
SSH1-209ENST00000551165 COQ5Q5HYK3 327 aa19■□□□□ 0.63
SSH1-209ENST00000551165 ATG9BQ674R7 924 aa19■□□□□ 0.63
SSH1-209ENST00000551165 NOXRED1Q6NXP6 359 aa19■□□□□ 0.63
SSH1-209ENST00000551165 TBC1D21Q8IYX1 336 aa19■□□□□ 0.63
SSH1-209ENST00000551165 MINDY1Q8N5J2 469 aa19■□□□□ 0.63
SSH1-209ENST00000551165 JPH3Q8WXH2 748 aaPredicted RBP19■□□□□ 0.63
SSH1-209ENST00000551165 S100A14Q9HCY8 104 aa19■□□□□ 0.63
SSH1-209ENST00000551165 CUEDC1Q9NWM3 386 aaPredicted RBP19■□□□□ 0.63
SSH1-209ENST00000551165 STX18Q9P2W9 335 aaKnown RBP19■□□□□ 0.63
SSH1-209ENST00000551165 VPS29Q9UBQ0 182 aa19■□□□□ 0.63
SSH1-209ENST00000551165 PCDHGA11Q9Y5H2 935 aa19■□□□□ 0.63
SSH1-209ENST00000551165 PIPSLA2A3N6 862 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 PI15O43692 258 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 DGKEP52429 567 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 UBXN2BQ14CS0 331 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 MED27Q6P2C8 311 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 SYT13Q7L8C5 426 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 DENND6BQ8NEG7 585 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 BHLHE22Q8NFJ8 381 aaPredicted RBP18.99■□□□□ 0.63
SSH1-209ENST00000551165 WDR34Q96EX3 536 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 MAGEB10Q96LZ2 347 aaPredicted RBP18.99■□□□□ 0.63
SSH1-209ENST00000551165 OR2M4Q96R27 311 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 TMEM168Q9H0V1 697 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 PRM3Q9NNZ6 103 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 PPT2Q9UMR5 302 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 AXIN1O15169 862 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 ANPEPP15144 967 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 IDSP22304 550 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 SFSWAPQ12872 951 aaKnown RBP18.99■□□□□ 0.63
SSH1-209ENST00000551165 CSTF3Q12996 717 aaKnown RBP18.99■□□□□ 0.63
SSH1-209ENST00000551165 CYP2A13Q16696 494 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 DLEU7Q6UYE1 221 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 FAM20CQ8IXL6 584 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 CAMK1GQ96NX5 476 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 CLMPQ9H6B4 373 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 GON4LQ3T8J9 2241 aa18.99■□□□□ 0.63
SSH1-209ENST00000551165 NPIPB8E9PQR5 432 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 SAP18O00422 153 aaKnown RBP18.98■□□□□ 0.63
SSH1-209ENST00000551165 BAG2O95816 211 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 SOX11P35716 441 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 CTBSQ01459 385 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 SLC34A1Q06495 639 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 C6orf10Q5SRN2 563 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 Q6ZSR6 202 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 TMEM145Q8NBT3 493 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 GPR156Q8NFN8 814 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 OR13H1Q8NG92 308 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 TMEM125Q96AQ2 219 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 BIRC7Q96CA5 298 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 WDR92Q96MX6 357 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 HOPXQ9BPY8 73 aaPredicted RBP18.98■□□□□ 0.63
SSH1-209ENST00000551165 GPR174Q9BXC1 333 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 GID8Q9NWU2 228 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 ABCD2Q9UBJ2 740 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 USP22Q9UPT9 525 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 NEUROG3Q9Y4Z2 214 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 PCDHA9Q9Y5H5 950 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 TRBV23OR9-2A0A075B6M9 112 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 KLHL33A6NCF5 533 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 H3BNX3 289 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 BCAS2O75934 225 aaPredicted RBP18.98■□□□□ 0.63
SSH1-209ENST00000551165 RPN2P04844 631 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 HOXC4P09017 264 aaPredicted RBP18.98■□□□□ 0.63
SSH1-209ENST00000551165 RAE1P78406 368 aaKnown RBP18.98■□□□□ 0.63
SSH1-209ENST00000551165 TRIM25Q14258 630 aaKnown RBP18.98■□□□□ 0.63
SSH1-209ENST00000551165 RPE65Q16518 533 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 UAP1L1Q3KQV9 507 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 LCTLQ6UWM7 567 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 SLC22A18ASQ8N1D0 253 aa18.98■□□□□ 0.63
SSH1-209ENST00000551165 SETD7Q8WTS6 366 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms