RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 ZDHHC24Q6UX98 284 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 MBOAT1Q6ZNC8 495 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 VPS39Q96JC1 886 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 CUTCQ9NTM9 273 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 MED13Q9UHV7 2174 aa16.5■□□□□ 0.23
CHMP1A-208ENST00000550102 BAHCC1Q9P281 2608 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 A0A0J9YVX5 310 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 RFPL1O75677 317 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 TUBB4AP04350 444 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 CD63P08962 238 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 HIST1H2AGP0C0S8 130 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 HIST1H2ADP20671 130 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 CCND1P24385 295 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 PGGT1BP53609 377 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 AP1S2P56377 157 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 NFATC3Q12968 1075 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 SLC9A5Q14940 896 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 FRMPD2BQ6IN97 320 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 TTLL10Q6ZVT0 673 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 ADCK2Q7Z695 626 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 PAQR7Q86WK9 346 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 LRRC56Q8IYG6 542 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 MNS1Q8NEH6 495 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 C9orf43Q8TAL5 461 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 FKBP10Q96AY3 582 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 HIST1H2AHQ96KK5 128 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 HIST1H2AJQ99878 128 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 H2AFJQ9BTM1 129 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 TRIM54Q9BYV2 358 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 PCBD2Q9H0N5 130 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 SLC25A18Q9H1K4 315 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 SMYD2Q9NRG4 433 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 STARD5Q9NSY2 213 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 ARL15Q9NXU5 204 aa16.49■□□□□ 0.23
CHMP1A-208ENST00000550102 ESYT3A0FGR9 886 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 FAM159BA6NKW6 160 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 ENO2P09104 434 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 ATXN8OSP0DMR3 200 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 ALAS2P22557 587 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 SLC12A2P55011 1212 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 SLC7A5Q01650 507 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 TRADDQ15628 312 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 FAM214AQ32MH5 1076 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 WASHC2DQ5SRD0 308 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 FAM69BQ5VUD6 431 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 MLIPQ5VWP3 458 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 AGTRAPQ6RW13 159 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 RAB43Q86YS6 212 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 APLFQ8IW19 511 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 NKAPQ8N5F7 415 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 ADAMTS17Q8TE56 1095 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 RERGQ96A58 199 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 TRIM44Q96DX7 344 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 PDLIM5Q96HC4 596 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 CPNE1Q99829 537 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 MCMBPQ9BTE3 642 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 LRRC1Q9BTT6 524 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 POPDC3Q9HBV1 291 aa16.48■□□□□ 0.23
CHMP1A-208ENST00000550102 LOC105369274A0A096LPK9 316 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 LOC102723532A0A0G2JNH3 316 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 HYKKA2RU49 373 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 MKRN2OSH3BPM6 223 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 PIAS1O75925 651 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 EIF2S1P05198 315 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 PIM1P11309 404 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 HRH2P25021 359 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 STX2P32856 288 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 GP5P40197 560 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 FOLR3P41439 243 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 MAGEA4P43358 317 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 TAS2R39P59534 338 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 GPX6P59796 221 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 RELAQ04206 551 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 ZNF460Q14592 562 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 C3orf62Q6ZUJ4 267 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 CYS1Q717R9 158 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 OR4N4Q8N0Y3 316 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 OR2Y1Q8NGV0 311 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 ATL1Q8WXF7 558 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 TSPAN17Q96FV3 270 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 RBBP8Q99708 897 aa16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 CUEDC1Q9NWM3 386 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 PTRH2Q9Y3E5 179 aaKnown RBP16.47■□□□□ 0.23
CHMP1A-208ENST00000550102 TNRC6AQ8NDV7 1962 aaKnown RBP16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 CXorf49A8MYA2 514 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 B8ZZF3 427 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 H0YGG7 62 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 HAT1O14929 419 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 KLF7O75840 302 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 ITGAXP20702 1163 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 ARF3P61204 181 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 POU4F1Q01851 419 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 GUCY2DQ02846 1103 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 NAE1Q13564 534 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 MUM1Q2TAK8 710 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 PRTGQ2VWP7 1150 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 CPZQ66K79 652 aa16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 CAPN13Q6MZZ7 669 aaPredicted RBP16.46■□□□□ 0.23
CHMP1A-208ENST00000550102 SBSNQ6UWP8 590 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms