RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 E7EQ34 232 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 H3BMH7 237 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 KLHL2O95198 593 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 MT-ND3P03897 115 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 NTRK1P04629 796 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 KCNC1P48547 511 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 RELAQ04206 551 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 BROXQ5VW32 411 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 EMBQ6PCB8 327 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 PAQR7Q86WK9 346 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 C17orf64Q86WR6 236 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 ESX1Q8N693 406 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 GALNT6Q8NCL4 622 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 RHBDF1Q96CC6 855 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 RNF31Q96EP0 1072 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 SPRTNQ9H040 489 aaPredicted RBP18.57■□□□□ 0.56
DDX54-207ENST00000550016 TMEM184CQ9NVA4 438 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 SSUH2Q9Y2M2 353 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 AP1M2Q9Y6Q5 423 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 CCDC88CQ9P219 2028 aa18.57■□□□□ 0.56
DDX54-207ENST00000550016 EPG5Q9HCE0 2579 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 TEX51A0A1B0GUA7 166 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 SRPX2O60687 465 aaPredicted RBP18.56■□□□□ 0.56
DDX54-207ENST00000550016 CPNE3O75131 537 aaKnown RBP18.56■□□□□ 0.56
DDX54-207ENST00000550016 SHBGP04278 402 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 TUBBP07437 444 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 ITPKBP27987 946 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 HSD17B3P37058 310 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 ACAP2Q15057 778 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 PTCHD3Q3KNS1 767 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 SULT1C3Q6IMI6 304 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 FBXO42Q6P3S6 717 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 KLC3Q6P597 504 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 TLDC1Q6P9B6 456 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 TIFABQ6ZNK6 161 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 RNF44Q7L0R7 432 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 TCAIMQ8N3R3 496 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 IL22RA1Q8N6P7 574 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 PPCSQ9HAB8 311 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 WDR70Q9NW82 654 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 CUEDC1Q9NWM3 386 aaPredicted RBP18.56■□□□□ 0.56
DDX54-207ENST00000550016 CD274Q9NZQ7 290 aa18.56■□□□□ 0.56
DDX54-207ENST00000550016 PSMC3IPQ9P2W1 217 aaPredicted RBP18.56■□□□□ 0.56
DDX54-207ENST00000550016 IQANK1A0A1B0GTG1 560 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 NCF1BA6NI72 391 aaPredicted RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 NCF1CA8MVU1 366 aaPredicted RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 H7BY64 318 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 ZNF749O43361 778 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 NRP2O60462 931 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 KERAO60938 352 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 S100BP04271 92 aaPredicted RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 CTSBP07858 339 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 HBQ1P09105 142 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 CCNYL3P0C7X3 344 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 COL6A2P12110 1019 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 NCF1P14598 390 aaPredicted RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 EZRP15311 586 aaKnown RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 GGT5P36269 586 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 TLE3Q04726 772 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 ABHD18Q0P651 414 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 TCTE1Q5JU00 501 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 MANEAQ5SRI9 462 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 PRAMEF17Q5VTA0 474 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 ADCK2Q7Z695 626 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 THOC6Q86W42 341 aaKnown RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 KLHDC8AQ8IYD2 350 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 RHEBL1Q8TAI7 183 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 CAVIN3Q969G5 261 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 CABS1Q96KC9 395 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 ZNF285Q96NJ3 590 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 PRAP1Q96NZ9 151 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 GPR78Q96P69 363 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 OR4K3Q96R72 315 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 CCNL2Q96S94 520 aaPredicted RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 ATOH8Q96SQ7 321 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 ZFYVE21Q9BQ24 234 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 SELENOSQ9BQE4 189 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 SLC7A5P2Q9GIP4 190 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 ACTR5Q9H9F9 607 aaPredicted RBP18.55■□□□□ 0.56
DDX54-207ENST00000550016 IRAK4Q9NWZ3 460 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 RAB21Q9UL25 225 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 PADI1Q9ULC6 663 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 SH2B3Q9UQQ2 575 aa18.55■□□□□ 0.56
DDX54-207ENST00000550016 PTPRQQ9UMZ3 2332 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 A0A0J9YVX5 310 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 TAPBPO15533 448 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 ZSCAN9O15535 394 aaPredicted RBP18.54■□□□□ 0.56
DDX54-207ENST00000550016 RFPL1O75677 317 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 GLRBP48167 497 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 VSX2P58304 361 aaPredicted RBP18.54■□□□□ 0.56
DDX54-207ENST00000550016 FRMPD2BQ6IN97 320 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 PLD6Q8N2A8 252 aaKnown RBP18.54■□□□□ 0.56
DDX54-207ENST00000550016 ZNF655Q8N720 491 aaPredicted RBP18.54■□□□□ 0.56
DDX54-207ENST00000550016 SLC38A9Q8NBW4 561 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 PDPRQ8NCN5 879 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 HNRNPLLQ8WVV9 542 aaKnown RBP18.54■□□□□ 0.56
DDX54-207ENST00000550016 EXT2Q93063 718 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 CLIP3Q96DZ5 547 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 LRFN5Q96NI6 719 aa18.54■□□□□ 0.56
DDX54-207ENST00000550016 CNOT10Q9H9A5 744 aaKnown RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms