RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 LSMEM2Q8N112 164 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 CYP4Z2PQ8N1L4 340 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 PIH1D2Q8WWB5 315 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 JPH3Q8WXH2 748 aaPredicted RBP14.58□□□□□ -0.08
CUX1-214ENST00000550008 KCNN1Q92952 543 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 PRAP1Q96NZ9 151 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 C11orf16Q9NQ32 467 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 IFT80Q9P2H3 777 aaPredicted RBP14.58□□□□□ -0.08
CUX1-214ENST00000550008 PHF24Q9UPV7 400 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 ZNF451Q9Y4E5 1061 aa14.58□□□□□ -0.08
CUX1-214ENST00000550008 WASH4PA8MWX3 477 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 AP3D1O14617 1153 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 CCNYL3P0C7X3 344 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 PTNP21246 168 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ZNF10P21506 573 aaPredicted RBP14.57□□□□□ -0.08
CUX1-214ENST00000550008 OR1E2P47887 323 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 SPINT3P49223 89 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 TAS2R41P59536 307 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 HEPACAMQ14CZ8 416 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 FAM219BQ5XKK7 198 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 BHLHB9Q6PI77 547 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 MYEOVQ96EZ4 313 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ART5Q96L15 291 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 CLDND1Q9NY35 253 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 PRSS21Q9Y6M0 314 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 DOCK5Q9H7D0 1870 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 DLEC1Q9Y238 1755 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 RTCAO00442 366 aaKnown RBP14.57□□□□□ -0.08
CUX1-214ENST00000550008 GMFGO60234 142 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 KELP23276 732 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ARNTP27540 789 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ZNF140P52738 457 aaPredicted RBP14.57□□□□□ -0.08
CUX1-214ENST00000550008 ZXDBP98169 803 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 DHCR24Q15392 516 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 SYT16Q17RD7 645 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 KLHL12Q53G59 568 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ZNF805Q5CZA5 627 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ARMC4Q5T2S8 1044 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 LEMD2Q8NC56 503 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 WFIKKN2Q8TEU8 576 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 SCRN2Q96FV2 425 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 KXD1Q9BQD3 176 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 PRRG3Q9BZD7 231 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ENOPH1Q9UHY7 261 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 DLGAP4Q9Y2H0 992 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 PCDHGA7Q9Y5G6 932 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 TRIM43BA6NCK2 446 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 EFCAB10A6NFE3 127 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 C8orf89P0DMQ9 161 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 GSTM5P46439 218 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 CLCN4P51793 760 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 LRRC32Q14392 662 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 TMIGD1Q6UXZ0 262 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 RNF44Q7L0R7 432 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 SLCO6A1Q86UG4 719 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 RAB8BQ92930 207 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 COL21A1Q96P44 957 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 HMG20AQ9NP66 347 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 SATB2Q9UPW6 733 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 WASH3PC4AMC7 463 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 UGT2B17O75795 530 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 MED26O95402 600 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ARMCX6Q7L4S7 300 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 TAF8Q7Z7C8 310 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 RNF175Q8N4F7 328 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 FIBINQ8TAL6 211 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 WFDC5Q8TCV5 224 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 GIPC3Q8TF64 312 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 HMGB4Q8WW32 186 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 KCNC2Q96PR1 638 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 EFCAB11Q9BUY7 163 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 RHCGQ9UBD6 479 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 ERGIC3Q9Y282 383 aa14.57□□□□□ -0.08
CUX1-214ENST00000550008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 FAM25AB3EWG3 89 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 FAM25CB3EWG5 89 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 FAM25GB3EWG6 89 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ERI3O43414 337 aaKnown RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 RGS10O43665 173 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ENO2P09104 434 aaPredicted RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 CTSAP10619 480 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 PIGFQ07326 219 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 MEP1AQ16819 746 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 KBTBD6Q86V97 674 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 PRSS58Q8IYP2 241 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 DEPDC4Q8N2C3 294 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 WBP2Q969T9 261 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ZNF641Q96N77 438 aaPredicted RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 IL4I1Q96RQ9 567 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 SLAMF8Q9P0V8 285 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 C6orf47O95873 294 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 WDR5P61964 334 aaKnown RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 DOC2AQ14183 400 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ZNF783Q6ZMS7 281 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.56□□□□□ -0.08
CUX1-214ENST00000550008 LRRTM4Q86VH4 590 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 MFSD6LQ8IWD5 586 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 LINC01599Q8WXQ3 324 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 TOP1MTQ969P6 601 aa14.56□□□□□ -0.08
CUX1-214ENST00000550008 PHF21AQ96BD5 680 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms