RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ZBTB14O43829 449 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 FAM155BO75949 473 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ZIC2O95409 532 aaPredicted RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 UMODP07911 640 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 HBQ1P09105 142 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 CMPK1P30085 196 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 OTX2P32243 289 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 PMS2P54278 862 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ARF3P61204 181 aaPredicted RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 TBPL1P62380 186 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 DCDP81605 110 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 PRDX1Q06830 199 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 PDAP1Q13442 181 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ATP1A4Q13733 1029 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ARHGAP19Q14CB8 494 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 EFTUD2Q15029 972 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 HKDC1Q2TB90 917 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ZC3H12BQ5HYM0 836 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 FAM45BPQ6NSW5 357 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 UGT3A1Q6NUS8 523 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 MRPL14Q6P1L8 145 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 AGTRAPQ6RW13 159 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 MAATS1Q7Z4T9 603 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ZNF605Q86T29 641 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 CCDC25Q86WR0 208 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 SPATA6LQ8N4H0 392 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 RAB42Q8N4Z0 105 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 AMER2Q8N7J2 671 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 NOA1Q8NC60 698 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 FAM45AQ8TCE6 357 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 PYROXD1Q8WU10 500 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ZNF592Q92610 1267 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ALKBH8Q96BT7 664 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 PYCR2Q96C36 320 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 C10orf90Q96M02 699 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 PRAP1Q96NZ9 151 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 OR2A5Q96R48 311 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 TRIM4Q9C037 500 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 SLC25A18Q9H1K4 315 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ADNPQ9H2P0 1102 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 CAB39LQ9H9S4 337 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 TXLNGQ9NUQ3 528 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 ZFATQ9P243 1243 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 IFT80Q9P2H3 777 aaPredicted RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 CTSFQ9UBX1 484 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 TP53TG5Q9Y2B4 290 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 MTO1Q9Y2Z2 717 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 MRPS2Q9Y399 296 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 PTRH2Q9Y3E5 179 aaKnown RBP9.35□□□□□ -0.91
HDAC7-229ENST00000549883 SPTA1P02549 2419 aa9.35□□□□□ -0.91
HDAC7-229ENST00000549883 A0A1B0GX78 115 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 TCRBV9S1A1TA0A576 114 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 HYKKA2RU49 373 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 FITM1A5D6W6 292 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 NPEPPSL1A6NEC2 478 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 C9J4A7 227 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 EIF3FO00303 357 aaPredicted RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 DSCR3O14972 297 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 ALOX12BO75342 701 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 FKBP9O95302 570 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 WISP3O95389 354 aaPredicted RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 RECKO95980 971 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 C8GP07360 202 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 ZNF37AP17032 561 aaPredicted RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 AGXTP21549 392 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 RGS4P49798 205 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 CCL11P51671 97 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 IL2P60568 153 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 CALCOCO2Q13137 446 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 NAE1Q13564 534 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 GRM7Q14831 915 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 PRTGQ2VWP7 1150 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 C18orf21Q32NC0 220 aaPredicted RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 THEMIS2Q5TEJ8 643 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 SBSNQ6UWP8 590 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 PRICKLE2Q7Z3G6 844 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 PALM2Q8IXS6 379 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 MYO1HQ8N1T3 1032 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 ARHGEF39Q8N4T4 335 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 BBOF1Q8ND07 529 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 C9orf43Q8TAL5 461 aaPredicted RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 PROKR1Q8TCW9 393 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 MCOLN3Q8TDD5 553 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 VPS39Q96JC1 886 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 CCDC138Q96M89 665 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 OR4K3Q96R72 315 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 ZFYVE21Q9BQ24 234 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 DPH2Q9BQC3 489 aaPredicted RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 PARVBQ9HBI1 364 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 ENAMQ9NRM1 1142 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 ZDHHC18Q9NUE0 388 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 UTP6Q9NYH9 597 aaKnown RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 DMGDHQ9UI17 866 aaKnown RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 SRPK3Q9UPE1 567 aa9.34□□□□□ -0.91
HDAC7-229ENST00000549883 RUVBL1Q9Y265 456 aaKnown RBP9.34□□□□□ -0.91
HDAC7-229ENST00000549883 FEZF1A0PJY2 475 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 CTAGE15A4D2H0 777 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 FAM159BA6NKW6 160 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 A6NL46 340 aa9.33□□□□□ -0.92
HDAC7-229ENST00000549883 SLC16A5O15375 505 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms