RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 CFAP36Q96G28 342 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 VPS39Q96JC1 886 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 VPS50Q96JG6 964 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 FER1L6-AS2Q96M78 137 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 DPH7Q9BTV6 452 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 SLC25A23Q9BV35 468 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 PCBD2Q9H0N5 130 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 SLC26A1Q9H2B4 701 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 SLC6A20Q9NP91 592 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 CCDC177Q9NQR7 707 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-206ENST00000548984 ZNF71Q9NQZ8 489 aaPredicted RBP9.79□□□□□ -0.84
PFDN5-206ENST00000548984 TAC3Q9UHF0 121 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 PTRH2Q9Y3E5 179 aaKnown RBP9.79□□□□□ -0.84
PFDN5-206ENST00000548984 TEX264Q9Y6I9 313 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 SEC16AO15027 2179 aa9.79□□□□□ -0.84
PFDN5-206ENST00000548984 HYKKA2RU49 373 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 KRT87PA6NCN2 255 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 BANF1O75531 89 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 WISP1O95388 367 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 CTSBP07858 339 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 F7P08709 466 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 HIST1H2AGP0C0S8 130 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 HIST1H2ADP20671 130 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 ITGAXP20702 1163 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 ALAS2P22557 587 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 IMPA1P29218 277 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 OTX2P32243 289 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 PHBP35232 272 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 CARSP49589 748 aaKnown RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 CSRP3P50461 194 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 PLTPP55058 493 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 AP1S2P56377 157 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 VSX2P58304 361 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 IL2P60568 153 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 NFKB2Q00653 900 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 MGAT5Q09328 741 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 PDAP1Q13442 181 aaKnown RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 NAB1Q13506 487 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 TSTA3Q13630 321 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 ATP1A4Q13733 1029 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 MUM1Q2TAK8 710 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 PRTGQ2VWP7 1150 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 WASHC2DQ5SRD0 308 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 TEDDM1Q5T9Z0 273 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 THEMIS2Q5TEJ8 643 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 GARNL3Q5VVW2 1013 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 ZNF425Q6IV72 752 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 SUSD1Q6UWL2 747 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 CYHR1Q6ZMK1 362 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 OVCH1Q7RTY7 1134 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 PTRH1Q86Y79 214 aaKnown RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 IGDCC3Q8IVU1 814 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 TEX19Q8NA77 164 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 FBXO36Q8NEA4 188 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 RERGQ96A58 199 aaPredicted RBP9.78□□□□□ -0.84
PFDN5-206ENST00000548984 PTERQ96BW5 349 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 LINGO1Q96FE5 620 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 HIST1H2AHQ96KK5 128 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 CCDC138Q96M89 665 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 NDNQ99608 321 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 HIST1H2AJQ99878 128 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 H2AFJQ9BTM1 129 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 ACAT2Q9BWD1 397 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 TRIM55Q9BYV6 548 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 DPH5Q9H2P9 285 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 PLAC1Q9HBJ0 212 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 MLXIPLQ9NP71 852 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 CDC14AQ9UNH5 594 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 ZNF451Q9Y4E5 1061 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 BOD1L1Q8NFC6 3051 aa9.78□□□□□ -0.84
PFDN5-206ENST00000548984 A0A0J9YVX5 310 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 FANCGO15287 622 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 DNAJB5O75953 348 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 AHSGP02765 367 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 ENO2P09104 434 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-206ENST00000548984 FDXRP22570 491 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 GABRB3P28472 473 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 STX2P32856 288 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 SLC12A2P55011 1212 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 TBPL1P62380 186 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 TLE1Q04724 770 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 CHAF1BQ13112 559 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 SLC9A5Q14940 896 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 RBM20Q5T481 1227 aaKnown RBP9.77□□□□□ -0.85
PFDN5-206ENST00000548984 VWA5B1Q5TIE3 1220 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 PRAMEF13Q5VWM6 474 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 FRMPD2BQ6IN97 320 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 IFT20Q8IY31 132 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 LRRC56Q8IYG6 542 aaPredicted RBP9.77□□□□□ -0.85
PFDN5-206ENST00000548984 CSNK1A1LQ8N752 337 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 GPATCH11Q8N954 259 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 CLEC1AQ8NC01 280 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 EEF1AKMT1Q8WVE0 214 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 ATL1Q8WXF7 558 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.77□□□□□ -0.85
PFDN5-206ENST00000548984 TSPAN17Q96FV3 270 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 CABS1Q96KC9 395 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 WDR83Q9BRX9 315 aaKnown RBP9.77□□□□□ -0.85
PFDN5-206ENST00000548984 TRIM54Q9BYV2 358 aa9.77□□□□□ -0.85
PFDN5-206ENST00000548984 EPN3Q9H201 632 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms