RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SP140Q13342 867 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 NAE1Q13564 534 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 EFTUD2Q15029 972 aaKnown RBP eCLIP15.1■□□□□ 0.01
DDX54-205ENST00000548786 UGT8Q16880 541 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 NKAIN1Q4KMZ8 207 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 PRAMEF13Q5VWM6 474 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 CPZQ66K79 652 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 AGTRAPQ6RW13 159 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 RNF44Q7L0R7 432 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 PAQR7Q86WK9 346 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 LRRC56Q8IYG6 542 aaPredicted RBP15.1■□□□□ 0.01
DDX54-205ENST00000548786 SPATA6LQ8N4H0 392 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 TTC29Q8NA56 475 aaPredicted RBP15.1■□□□□ 0.01
DDX54-205ENST00000548786 CDKL2Q92772 493 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 PYCR2Q96C36 320 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 MRRFQ96E11 262 aaKnown RBP15.1■□□□□ 0.01
DDX54-205ENST00000548786 CCDC138Q96M89 665 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 ZFYVE21Q9BQ24 234 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 RHOJQ9H4E5 214 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 NSMCE4AQ9NXX6 385 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 KCNMB2Q9Y691 235 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 MAU2Q9Y6X3 613 aa15.1■□□□□ 0.01
DDX54-205ENST00000548786 PCM1Q15154 2024 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 A0A1B0GX78 115 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 ARGFXA6NJG6 315 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 H0YGG7 62 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 H7BY64 318 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 CDC7O00311 574 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 FAM155BO75949 473 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 RAB40ALP0C0E4 278 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 HIST1H2AGP0C0S8 130 aaPredicted RBP15.09■□□□□ 0.01
DDX54-205ENST00000548786 ZNF37AP17032 561 aaPredicted RBP15.09■□□□□ 0.01
DDX54-205ENST00000548786 HIST1H2ADP20671 130 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 ITGAXP20702 1163 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 OTX2P32243 289 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 OR1D4P47884 311 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 SLC12A2P55011 1212 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 ARF3P61204 181 aaPredicted RBP15.09■□□□□ 0.01
DDX54-205ENST00000548786 GRM7Q14831 915 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 TCTE1Q5JU00 501 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 FBXO42Q6P3S6 717 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 PPM1NQ8N819 430 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 PROKR1Q8TCW9 393 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 FBF1Q8TES7 1133 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 ANKRD49Q8WVL7 239 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 HIST1H2AHQ96KK5 128 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 PRAP1Q96NZ9 151 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 HIST1H2AJQ99878 128 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 DPH2Q9BQC3 489 aaPredicted RBP15.09■□□□□ 0.01
DDX54-205ENST00000548786 H2AFJQ9BTM1 129 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 LRRC4CQ9HCJ2 640 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 ZNF71Q9NQZ8 489 aaPredicted RBP15.09■□□□□ 0.01
DDX54-205ENST00000548786 PTRH2Q9Y3E5 179 aaKnown RBP15.09■□□□□ 0.01
DDX54-205ENST00000548786 KLK4Q9Y5K2 254 aa15.09■□□□□ 0.01
DDX54-205ENST00000548786 GCN1Q92616 2671 aaKnown RBP15.09■□□□□ 0.01
DDX54-205ENST00000548786 HYKKA2RU49 373 aa15.08■□□□□ 0
DDX54-205ENST00000548786 CTAGE15A4D2H0 777 aa15.08■□□□□ 0
DDX54-205ENST00000548786 FAM159BA6NKW6 160 aa15.08■□□□□ 0
DDX54-205ENST00000548786 DSCR3O14972 297 aa15.08■□□□□ 0
DDX54-205ENST00000548786 SLC16A5O15375 505 aa15.08■□□□□ 0
DDX54-205ENST00000548786 PHGDHO43175 533 aaKnown RBP15.08■□□□□ 0
DDX54-205ENST00000548786 CNOT3O75175 753 aaKnown RBP15.08■□□□□ 0
DDX54-205ENST00000548786 CTAGE8P0CG41 777 aa15.08■□□□□ 0
DDX54-205ENST00000548786 NR1D1P20393 614 aa15.08■□□□□ 0
DDX54-205ENST00000548786 GMPRP36959 345 aa15.08■□□□□ 0
DDX54-205ENST00000548786 ARSFP54793 590 aa15.08■□□□□ 0
DDX54-205ENST00000548786 CBLBQ13191 982 aa15.08■□□□□ 0
DDX54-205ENST00000548786 USP10Q14694 798 aaKnown RBP15.08■□□□□ 0
DDX54-205ENST00000548786 NAA25Q14CX7 972 aa15.08■□□□□ 0
DDX54-205ENST00000548786 HKDC1Q2TB90 917 aa15.08■□□□□ 0
DDX54-205ENST00000548786 KBTBD12Q3ZCT8 623 aa15.08■□□□□ 0
DDX54-205ENST00000548786 CRTC2Q53ET0 693 aaPredicted RBP15.08■□□□□ 0
DDX54-205ENST00000548786 COLEC12Q5KU26 742 aa15.08■□□□□ 0
DDX54-205ENST00000548786 UBAP2Q5T6F2 1119 aaKnown RBP15.08■□□□□ 0
DDX54-205ENST00000548786 SHISA6Q6ZSJ9 500 aa15.08■□□□□ 0
DDX54-205ENST00000548786 CTAGE6Q86UF2 777 aa15.08■□□□□ 0
DDX54-205ENST00000548786 PTRH1Q86Y79 214 aaKnown RBP15.08■□□□□ 0
DDX54-205ENST00000548786 CTAGE4Q8IX94 777 aa15.08■□□□□ 0
DDX54-205ENST00000548786 CSNK1A1LQ8N752 337 aa15.08■□□□□ 0
DDX54-205ENST00000548786 MNS1Q8NEH6 495 aa15.08■□□□□ 0
DDX54-205ENST00000548786 IFT81Q8WYA0 676 aa15.08■□□□□ 0
DDX54-205ENST00000548786 CABS1Q96KC9 395 aa15.08■□□□□ 0
DDX54-205ENST00000548786 CPNE1Q99829 537 aa15.08■□□□□ 0
DDX54-205ENST00000548786 TRIM55Q9BYV6 548 aa15.08■□□□□ 0
DDX54-205ENST00000548786 GPAMQ9HCL2 828 aa15.08■□□□□ 0
DDX54-205ENST00000548786 SLC22A11Q9NSA0 550 aa15.08■□□□□ 0
DDX54-205ENST00000548786 ZDHHC18Q9NUE0 388 aa15.08■□□□□ 0
DDX54-205ENST00000548786 GEMIN8Q9NWZ8 242 aaKnown RBP15.08■□□□□ 0
DDX54-205ENST00000548786 DMGDHQ9UI17 866 aaKnown RBP15.08■□□□□ 0
DDX54-205ENST00000548786 PADI2Q9Y2J8 665 aa15.08■□□□□ 0
DDX54-205ENST00000548786 SEC16AO15027 2179 aa15.08■□□□□ 0
DDX54-205ENST00000548786 FFAR3O14843 346 aa15.07■□□□□ 0
DDX54-205ENST00000548786 GPR42O15529 346 aa15.07■□□□□ 0
DDX54-205ENST00000548786 P2RX6O15547 441 aa15.07■□□□□ 0
DDX54-205ENST00000548786 SRPX2O60687 465 aaPredicted RBP15.07■□□□□ 0
DDX54-205ENST00000548786 KLF7O75840 302 aaPredicted RBP15.07■□□□□ 0
DDX54-205ENST00000548786 C1QAP02745 245 aa15.07■□□□□ 0
DDX54-205ENST00000548786 CDH1P12830 882 aa15.07■□□□□ 0
DDX54-205ENST00000548786 EZRP15311 586 aaKnown RBP15.07■□□□□ 0
DDX54-205ENST00000548786 FOLR3P41439 243 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms