RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 A0A1W2PN81 502 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 SMIM30A4D0T7 59 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 C2orf81A6NN90 581 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 PRSS46E5RG02 174 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 SLC30A4O14863 429 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 SLC22A2O15244 555 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 FLRT2O43155 660 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 IGHV4-38-2P0DP08 117 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 LIFP15018 202 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 EPORP19235 508 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 ITIH1P19827 911 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 CCND3P30281 292 aaPredicted RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 CSTF2P33240 577 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS29-205ENST00000548539 CHRNA7P36544 502 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 KLC1Q07866 573 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 RBBP5Q15291 538 aaKnown RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 SMU1Q2TAY7 513 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 IQCCQ4KMZ1 466 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 SLC25A53Q5H9E4 307 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 GLRA4Q5JXX5 417 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 FAM46CQ5VWP2 391 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 WBP2NLQ6ICG8 309 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 FAM166AQ6J272 317 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 NOTUMQ6P988 496 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 PODNL1Q6PEZ8 512 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 PRSS55Q6UWB4 352 aaPredicted RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 C15orf39Q6ZRI6 1047 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 SLC26A9Q7LBE3 791 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 NDUFAF2Q8N183 169 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 RFLNBQ8N5W9 214 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 CCDC63Q8NA47 563 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 NOA1Q8NC60 698 aaKnown RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 OR52N5Q8NH56 324 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 TSACCQ96A04 125 aaPredicted RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 SENP5Q96HI0 755 aaPredicted RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 PANK2Q9BZ23 570 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 OR2B2Q9GZK3 357 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 LSG1Q9H089 658 aaKnown RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 SHARPINQ9H0F6 387 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 TMEM206Q9H813 350 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 FAM118AQ9NWS6 357 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 PKD2L2Q9NZM6 624 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 ACAD8Q9UKU7 415 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 LIPT1Q9Y234 373 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 HBS1LQ9Y450 684 aaKnown RBP3.75□□□□□ -1.81
VPS29-205ENST00000548539 SNX5Q9Y5X3 404 aa3.75□□□□□ -1.81
VPS29-205ENST00000548539 TRIM64A6NGJ6 449 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 TRIM64BA6NI03 449 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 F8VVB4 439 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 F8VWA3 439 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 SLC33A1O00400 549 aaPredicted RBP3.74□□□□□ -1.81
VPS29-205ENST00000548539 FPGTO14772 594 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 ATP6V0E1O15342 81 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 FGF17O60258 216 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 LMX1BO60663 402 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 ZNF432O94892 652 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 CAVIN2O95810 425 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 BAG3O95817 575 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 NGFP01138 241 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 FRMD6-AS1P0C7T7 363 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 IGHV4-31P0DP07 118 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 EEF2P13639 858 aaKnown RBP3.74□□□□□ -1.81
VPS29-205ENST00000548539 ATP6V1B1P15313 513 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 LHCGRP22888 699 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 SSTR1P30872 391 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 CEACAM8P31997 349 aaPredicted RBP3.74□□□□□ -1.81
VPS29-205ENST00000548539 LBX1P52954 281 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 KRTAP10-12P60413 245 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 ST8SIA6P61647 398 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 GPR17Q13304 367 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 TAF13Q15543 124 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 RBBP7Q16576 425 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 ZC2HC1CQ53FD0 456 aaPredicted RBP3.74□□□□□ -1.81
VPS29-205ENST00000548539 ODF2Q5BJF6 829 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 SLC35D3Q5M8T2 416 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 SLC10A5Q5PT55 438 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 LYSMD4Q5XG99 296 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 CTR9Q6PD62 1173 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 RBMS3Q6XE24 437 aaKnown RBP3.74□□□□□ -1.81
VPS29-205ENST00000548539 IL17RELQ6ZVW7 336 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 CREBRFQ8IUR6 639 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 C4orf19Q8IY42 314 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 C10orf53Q8N6V4 93 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 STPG4Q8N801 248 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 KLHDC9Q8NEP7 349 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 OR7G3Q8NG95 312 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 MGARPQ8TDB4 240 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 AFAP1L1Q8TED9 768 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 UBE2Q2Q8WVN8 375 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 SEPT1Q8WYJ6 367 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 TM9SF4Q92544 642 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 KRT35Q92764 455 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 P2RX5Q93086 422 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 SGF29Q96ES7 293 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 PGM2Q96G03 612 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 NDNQ99608 321 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 EPYCQ99645 322 aa3.74□□□□□ -1.81
VPS29-205ENST00000548539 RIMS4Q9H426 269 aaPredicted RBP3.74□□□□□ -1.81
VPS29-205ENST00000548539 ZNF556Q9HAH1 456 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms