RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 GALNT7Q86SF2 657 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 PTRH1Q86Y79 214 aaKnown RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 RAB43Q86YS6 212 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 ZBED8Q8IZ13 594 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 PPFIBP2Q8ND30 876 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 OR2A1Q8NGT9 310 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 FAM45AQ8TCE6 357 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 MCOLN3Q8TDD5 553 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 EEF1AKMT1Q8WVE0 214 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 LINGO1Q96FE5 620 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 ABHD17AQ96GS6 310 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 WDR83Q9BRX9 315 aaKnown RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 ERP44Q9BS26 406 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 DPH7Q9BTV6 452 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 PLAC1Q9HBJ0 212 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 ZNF71Q9NQZ8 489 aaPredicted RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 ACSS2Q9NR19 701 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 CUTCQ9NTM9 273 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 TAC3Q9UHF0 121 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 VWA7Q9Y334 891 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 UTP11Q9Y3A2 253 aaKnown RBP9.11□□□□□ -0.95
USP15-208ENST00000548524 KLK4Q9Y5K2 254 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 MGAQ8IWI9 3026 aa9.11□□□□□ -0.95
USP15-208ENST00000548524 SMG1Q96Q15 3661 aaKnown RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 A0A1B0GX78 115 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 OR2A25A4D2G3 310 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 E7ENX8 843 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 SLC16A5O15375 505 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 CTSVO60911 334 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 HIST1H2AGP0C0S8 130 aaPredicted RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 HIST1H2ADP20671 130 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 SAT1P21673 171 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 OTX2P32243 289 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 FOLR3P41439 243 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 IL2P60568 153 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 ABATP80404 500 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 TIAL1Q01085 375 aaKnown RBP eCLIP9.1□□□□□ -0.95
USP15-208ENST00000548524 TAP2Q03519 686 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 PRDX1Q06830 199 aaKnown RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 CKAP4Q07065 602 aaKnown RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 CHAF1BQ13112 559 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 SP140Q13342 867 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 FRG1Q14331 258 aaKnown RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 FASTKD3Q14CZ7 662 aaKnown RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 FAM214AQ32MH5 1076 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 WASHC2DQ5SRD0 308 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 FAM69BQ5VUD6 431 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 ICE2Q659A1 982 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 RNF44Q7L0R7 432 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 STRA8Q7Z7C7 330 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 APLFQ8IW19 511 aaPredicted RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 PYROXD1Q8WU10 500 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 ZNF480Q8WV37 535 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 ALKBH8Q96BT7 664 aaKnown RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 HIST1H2AHQ96KK5 128 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 CCDC138Q96M89 665 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 HIST1H2AJQ99878 128 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 ZFYVE21Q9BQ24 234 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 PLCD4Q9BRC7 762 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 H2AFJQ9BTM1 129 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 RAB17Q9H0T7 212 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 SLC6A20Q9NP91 592 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 SAYSD1Q9NPB0 183 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 CCDC177Q9NQR7 707 aaPredicted RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 NSMCE4AQ9NXX6 385 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 WHRNQ9P202 907 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 ANKMY1Q9P2S6 941 aa9.1□□□□□ -0.95
USP15-208ENST00000548524 PTRH2Q9Y3E5 179 aaKnown RBP9.1□□□□□ -0.95
USP15-208ENST00000548524 HYKKA2RU49 373 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 E7ESA3 106 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 J3QKU1 62 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 PEX12O00623 359 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 DSCR3O14972 297 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 TP73O15350 636 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 EIF3HO15372 352 aaKnown RBP eCLIP9.09□□□□□ -0.95
USP15-208ENST00000548524 NRP2O60462 931 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 DNAJB5O75953 348 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 URI1O94763 535 aaPredicted RBP9.09□□□□□ -0.95
USP15-208ENST00000548524 ZIC2O95409 532 aaPredicted RBP9.09□□□□□ -0.95
USP15-208ENST00000548524 IMPA1P29218 277 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 CCL11P51671 97 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 WDR4P57081 412 aaKnown RBP9.09□□□□□ -0.95
USP15-208ENST00000548524 YBX1P67809 324 aaKnown RBP9.09□□□□□ -0.95
USP15-208ENST00000548524 SSPNQ14714 243 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 CPZQ66K79 652 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 DUPD1Q68J44 220 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 FRMPD2BQ6IN97 320 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 FBXO42Q6P3S6 717 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 ATG14Q6ZNE5 492 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 SLC26A11Q86WA9 606 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 PAQR7Q86WK9 346 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 METTL27Q8N6F8 245 aaPredicted RBP9.09□□□□□ -0.95
USP15-208ENST00000548524 CDKL2Q92772 493 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 RERGQ96A58 199 aaPredicted RBP9.09□□□□□ -0.95
USP15-208ENST00000548524 ITPKCQ96DU7 683 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 CABS1Q96KC9 395 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 C16orf45Q96MC5 204 aaPredicted RBP9.09□□□□□ -0.95
USP15-208ENST00000548524 ZNF285Q96NJ3 590 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 UCN2Q96RP3 112 aa9.09□□□□□ -0.95
USP15-208ENST00000548524 TRIM54Q9BYV2 358 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms