RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 STARD5Q9NSY2 213 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 CUTCQ9NTM9 273 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 NDOR1Q9UHB4 597 aa15.22■□□□□ 0.03
DDX54-204ENST00000546898 IGKV1-8A0A0C4DH67 115 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 A0A0J9YVX5 310 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 PIM1P11309 404 aaPredicted RBP15.21■□□□□ 0.03
DDX54-204ENST00000546898 EZRP15311 586 aaKnown RBP15.21■□□□□ 0.03
DDX54-204ENST00000546898 HRH2P25021 359 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 SSTR1P30872 391 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 PMS2P54278 862 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 VSX2P58304 361 aaPredicted RBP15.21■□□□□ 0.03
DDX54-204ENST00000546898 YBX1P67809 324 aaKnown RBP15.21■□□□□ 0.03
DDX54-204ENST00000546898 NKAIN1Q4KMZ8 207 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 PRAMEF13Q5VWM6 474 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 FRMPD2BQ6IN97 320 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 ZDHHC24Q6UX98 284 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 CAPN12Q6ZSI9 719 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 TTLL10Q6ZVT0 673 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 NKAPQ8N5F7 415 aaKnown RBP15.21■□□□□ 0.03
DDX54-204ENST00000546898 ANKRD7Q92527 254 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 FKBP10Q96AY3 582 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 VPS39Q96JC1 886 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 MCMBPQ9BTE3 642 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 TRIM54Q9BYV2 358 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 IFT80Q9P2H3 777 aaPredicted RBP15.21■□□□□ 0.03
DDX54-204ENST00000546898 TXNDC16Q9P2K2 825 aa15.21■□□□□ 0.03
DDX54-204ENST00000546898 MED13Q9UHV7 2174 aa15.21■□□□□ 0.02
DDX54-204ENST00000546898 TCRBV9S1A1TA0A576 114 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 B8ZZF3 427 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 NRP2O60462 931 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 RFPL1O75677 317 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 ONECUT2O95948 504 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 FOLR3P41439 243 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 EMP3P54852 163 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 PHKG1Q16816 387 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 WASHC2DQ5SRD0 308 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 MLIPQ5VWP3 458 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 MRPL14Q6P1L8 145 aaKnown RBP15.2■□□□□ 0.02
DDX54-204ENST00000546898 AGTRAPQ6RW13 159 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 RAB43Q86YS6 212 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 MNS1Q8NEH6 495 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 C9orf43Q8TAL5 461 aaPredicted RBP15.2■□□□□ 0.02
DDX54-204ENST00000546898 ATL1Q8WXF7 558 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 ZNF592Q92610 1267 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 IP6K3Q96PC2 410 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 CPNE1Q99829 537 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 SMYD2Q9NRG4 433 aa15.2■□□□□ 0.02
DDX54-204ENST00000546898 NOVA2Q9UNW9 492 aaKnown RBP15.2■□□□□ 0.02
DDX54-204ENST00000546898 FAM159BA6NKW6 160 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 MKRN2OSH3BPM6 223 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 KLF7O75840 302 aaPredicted RBP15.19■□□□□ 0.02
DDX54-204ENST00000546898 ALBP02768 609 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 SAT1P21673 171 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 ALAS2P22557 587 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 TAS2R39P59534 338 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 NFKB2Q00653 900 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 POU4F1Q01851 419 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 MUM1Q2TAK8 710 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 FBXO42Q6P3S6 717 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 LCTLQ6UWM7 567 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 MBOAT1Q6ZNC8 495 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 C3orf62Q6ZUJ4 267 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 ADCK2Q7Z695 626 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 CCDC25Q86WR0 208 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 MMGT1Q8N4V1 131 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 OR2Y1Q8NGV0 311 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 RBBP8Q99708 897 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 LRRC1Q9BTT6 524 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 SGPP1Q9BX95 441 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 FAM129AQ9BZQ8 928 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 SLC26A1Q9H2B4 701 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 ABCF3Q9NUQ8 709 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 TMEM184CQ9NVA4 438 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 CUEDC1Q9NWM3 386 aaPredicted RBP15.19■□□□□ 0.02
DDX54-204ENST00000546898 ARL15Q9NXU5 204 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 BSNQ9UPA5 3926 aa15.19■□□□□ 0.02
DDX54-204ENST00000546898 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
DDX54-204ENST00000546898 LOC105369274A0A096LPK9 316 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 LOC102723532A0A0G2JNH3 316 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 ESYT3A0FGR9 886 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 HYKKA2RU49 373 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 H0YGG7 62 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 TXNDC9O14530 226 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 ITGAXP20702 1163 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 STX2P32856 288 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 GP5P40197 560 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 MAGEA4P43358 317 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 PGGT1BP53609 377 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 SLC12A2P55011 1212 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 GPX6P59796 221 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 ARF3P61204 181 aaPredicted RBP15.18■□□□□ 0.02
DDX54-204ENST00000546898 SLC7A5Q01650 507 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 NFATC3Q12968 1075 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 NAB1Q13506 487 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 NAE1Q13564 534 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 SSPNQ14714 243 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 SLC9A5Q14940 896 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 TRADDQ15628 312 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 PRTGQ2VWP7 1150 aa15.18■□□□□ 0.02
DDX54-204ENST00000546898 CAPN13Q6MZZ7 669 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms