RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 TRAPPC9Q96Q05 1148 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 KCNA7Q96RP8 456 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 ZNF576Q9H609 170 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 SPATA7Q9P0W8 599 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 DLGAP4Q9Y2H0 992 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 EFCAB10A6NFE3 127 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 HCN1O60741 890 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 RFPL1O75677 317 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 DLGAP3O95886 979 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 JMJD7P0C870 316 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 ATF6P18850 670 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 ACRV1P26436 265 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 IFI44LQ53G44 452 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 ALKAL1Q6UXT8 129 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 RINLQ6ZS11 566 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 PIGWQ7Z7B1 504 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 RANBP3LQ86VV4 465 aaPredicted RBP11.51□□□□□ -0.57
CHERP-203ENST00000546361 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
CHERP-203ENST00000546361 C19orf18Q8NEA5 215 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 SMPDL3BQ92485 455 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 MIEF2Q96C03 454 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 LRRC3Q9BY71 257 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 TBL1XR1Q9BZK7 514 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 DENND2DQ9H6A0 471 aaPredicted RBP11.51□□□□□ -0.57
CHERP-203ENST00000546361 S100A14Q9HCY8 104 aa11.51□□□□□ -0.57
CHERP-203ENST00000546361 PGM3O95394 542 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 ALDOAP04075 364 aaKnown RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 PCBP2Q15366 365 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■■■■■ 26.8
CHERP-203ENST00000546361 SPANXN2Q5MJ10 180 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 ADGRG6Q86SQ4 1221 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 ZDHHC21Q8IVQ6 265 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 OR9I1Q8NGQ6 314 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 TSACCQ96A04 125 aaPredicted RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 TRMT2BQ96GJ1 504 aaKnown RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 IL17FQ96PD4 163 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 C17orf62Q9BQA9 187 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 REXO4Q9GZR2 422 aaKnown RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 POPDC3Q9HBV1 291 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 PHF11Q9UIL8 331 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 UTS2RQ9UKP6 389 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 LAMB2P55268 1798 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 TRIM24O15164 1050 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 LILRB3O75022 631 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 CHN2P52757 468 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 PCDH1Q08174 1060 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 GPR68Q15743 365 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 CRTC1Q6UUV9 634 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 RTN4RL1Q86UN2 441 aaPredicted RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 APLFQ8IW19 511 aaPredicted RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 GJD3Q8N144 294 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 CACTIN-AS1Q8N1I8 211 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 TMEM156Q8N614 296 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 NATD1Q8N6N6 113 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 MOSPD2Q8NHP6 518 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 DNAJB8Q8NHS0 232 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 DGAT2Q96PD7 388 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 ELL3Q9HB65 397 aaPredicted RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 ARAP2Q8WZ64 1704 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 FAM170BA6NMN3 283 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 A8MUI8 341 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 PEX12O00623 359 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 PRMT3O60678 531 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 SHOX2O60902 331 aaPredicted RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 ZNF217O75362 1048 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 G6PDP11413 515 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 POU2F1P14859 743 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 IGFBP5P24593 272 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 SLC6A4P31645 630 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 TTKP33981 857 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 KHKP50053 298 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 CDK9P50750 372 aaKnown RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 CLCN4P51793 760 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 CLCN7P51798 805 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 NRG3P56975 720 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 HNRNPKP61978 463 aaKnown RBP eCLIP11.5□□□□□ -0.579e-6■■■□□ 18.9
CHERP-203ENST00000546361 FAM189BP81408 668 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 SLC7A9P82251 487 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 ARMC4Q5T2S8 1044 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 SPPL3Q8TCT6 385 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 CGREF1Q99674 301 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 MGME1Q9BQP7 344 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 FBRSL1Q9HCM7 1045 aaKnown RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 POMPQ9Y244 141 aa11.5□□□□□ -0.57
CHERP-203ENST00000546361 MRPS7Q9Y2R9 242 aaKnown RBP11.5□□□□□ -0.57
CHERP-203ENST00000546361 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.49□□□□□ -0.57
CHERP-203ENST00000546361 LINC01553A4QN01 128 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 ZNF860A6NHJ4 632 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 BHMG1C9JSJ3 638 aaPredicted RBP11.49□□□□□ -0.57
CHERP-203ENST00000546361 PGRP06401 933 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 THEGLP0DJG4 465 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 PIM1P11309 404 aaPredicted RBP11.49□□□□□ -0.57
CHERP-203ENST00000546361 OXTRP30559 389 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 LSM3P62310 102 aaKnown RBP11.49□□□□□ -0.57
CHERP-203ENST00000546361 FOLH1Q04609 750 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 MED22Q15528 200 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 RTL10Q7L3V2 364 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 PACS2Q86VP3 889 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 ARFGAP1Q8N6T3 406 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 FAM81AQ8TBF8 368 aa11.49□□□□□ -0.57
CHERP-203ENST00000546361 C10orf82Q8WW14 230 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms