RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 PSKH2Q96QS6 385 aa8.43□□□□□ -1.06
ATXN3-216ENST00000545170 CPXM1Q96SM3 734 aa8.43□□□□□ -1.06
ATXN3-216ENST00000545170 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATXN3-216ENST00000545170 RNF121Q9H920 327 aa8.43□□□□□ -1.06
ATXN3-216ENST00000545170 STXBP5LQ9Y2K9 1186 aa8.43□□□□□ -1.06
ATXN3-216ENST00000545170 SNCAIPQ9Y6H5 919 aa8.43□□□□□ -1.06
ATXN3-216ENST00000545170 PXDNLA1KZ92 1463 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CASC3O15234 703 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CRTAPO75718 401 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ARL6IP5O75915 188 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 DNAJB5O75953 348 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 OR4F21O95013 312 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 IFNA5P01569 189 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CKMT1AP12532 417 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CHRNA5P30532 468 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 PBX1P40424 430 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 SMSP52788 366 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 HSPB3Q12988 150 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 PAN2Q504Q3 1202 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 IQCHQ86VS3 1027 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TM9SF2Q99805 663 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 IPPKQ9H8X2 491 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 VNN3Q9NY84 501 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CDC14AQ9UNH5 594 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 MAGED1Q9Y5V3 778 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 POM121CA8CG34 1229 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 EEF1E1-BLOC1S5C9J1V9 151 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 H7C4K7 107 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 B3GAT3O94766 335 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 EIF2DP41214 584 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 LSSP48449 732 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 SLC26A2P50443 739 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TUSC3Q13454 348 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 C22orf42Q6IC83 251 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 FSTL4Q6MZW2 842 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TMPRSS11BQ86T26 416 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 PHF13Q86YI8 300 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 YIPF7Q8N8F6 280 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 SHKBP1Q8TBC3 707 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 EXOSC8Q96B26 276 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 OR52B2Q96RD2 323 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 HBEGFQ99075 208 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 FAM83CQ9BQN1 747 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 LHPPQ9H008 270 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 PRDM12Q9H4Q4 367 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 HNRNPH3P31942 346 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 MAXP61244 160 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TROAPQ12815 778 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TLDC1Q6P9B6 456 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 JAGN1Q8N5M9 183 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 OR13J1Q8NGT2 312 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CERKQ8TCT0 537 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 MYLIPQ8WY64 445 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 AZIN2Q96A70 460 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 MASTLQ96GX5 879 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 GON7Q9BXV9 100 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CTPS2Q9NRF8 586 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 MOCS1Q9NZB8 636 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 FBXL21Q9UKT6 434 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ANXA4P09525 319 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ZNF823P16415 610 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 G0S2P27469 103 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CD34P28906 385 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 SREBF1P36956 1147 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 AQP2P41181 271 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ERVFC1P60507 584 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 RASGEF1BQ0VAM2 473 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TMEM69Q5SWH9 247 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ABHD11Q8NFV4 315 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 OR6Q1Q8NGQ2 317 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 NEIL3Q8TAT5 605 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CELF1Q92879 486 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 COPS5Q92905 334 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ADAD1Q96M93 576 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 OR4K3Q96R72 315 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CIPCQ9C0C6 399 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ABCG5Q9H222 651 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 F5H5P2 479 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 SHOXO15266 292 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 PRAMEF2O60811 474 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TFPIP10646 304 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 BCKDHAP12694 445 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ALAS2P22557 587 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 LAPTM4AQ15012 233 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 PEA15Q15121 130 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 CELF3Q5SZQ8 465 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 GSG1LQ6UXU4 331 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 KBTBD6Q86V97 674 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 SIMC1Q8NDZ2 872 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 MAPKAP1Q9BPZ7 522 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TSSK6Q9BXA6 273 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 NUDT4Q9NZJ9 180 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 NYAP2Q9P242 653 aa8.42□□□□□ -1.06
ATXN3-216ENST00000545170 ZMAT5Q9UDW3 170 aaKnown RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 TIMM13Q9Y5L4 95 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-216ENST00000545170 LRRC7Q96NW7 1537 aa8.41□□□□□ -1.06
ATXN3-216ENST00000545170 KIF1BO60333 1816 aa8.41□□□□□ -1.06
ATXN3-216ENST00000545170 A0A096LPI6 279 aa8.41□□□□□ -1.06
ATXN3-216ENST00000545170 MDFIC2A0A1B0GVS7 189 aa8.41□□□□□ -1.06
ATXN3-216ENST00000545170 KERAO60938 352 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms