RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 N4BP2L2Q92802 583 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 NEIL2Q969S2 332 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PRAP1Q96NZ9 151 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FAM111AQ96PZ2 611 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CUEDC1Q9NWM3 386 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC17A7Q9P2U7 560 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MID2Q9UJV3 735 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SNX7Q9UNH6 387 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SH2B3Q9UQQ2 575 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 BTRCQ9Y297 605 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ASB1Q9Y576 335 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 HEATR5BQ9P2D3 2071 aa13.92□□□□□ -0.18
TNFRSF1A-216ENST00000543995 IGKV1-8A0A0C4DH67 115 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 STX16-NPEPL1H3BU86 382 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 K7EPI3 171 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 STX16O14662 325 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PLD2O14939 933 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CLGNO14967 610 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 DLX3O60479 287 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CCL4P13236 92 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 EPB42P16452 691 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ITIH1P19827 911 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 HRH2P25021 359 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 MAPK10P53779 464 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PCBP2Q15366 365 aaKnown RBP eCLIP13.91□□□□□ -0.188e-7■■■■□ 21.8
TNFRSF1A-216ENST00000543995 AGBL2Q5U5Z8 902 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FCRL6Q6DN72 434 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ZYG11AQ6WRX3 759 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TEX9Q8N6V9 391 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 RDH11Q8TC12 318 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ARL8AQ96BM9 186 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CCDC126Q96EE4 140 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 OR6C1Q96RD1 312 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CAPS2Q9BXY5 557 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FANCEQ9HB96 536 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FAM60AQ9NP50 221 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SSU72Q9NP77 194 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TMEM184CQ9NVA4 438 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ANKMY1Q9P2S6 941 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PISDQ9UG56 409 aa13.91□□□□□ -0.18
TNFRSF1A-216ENST00000543995 LRRC14BA6NHZ5 514 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 G3V2L1 256 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TYROBPO43914 113 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 NRP2O60462 931 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FGF3P11487 239 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CPA3P15088 417 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 FOLR1P15328 257 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GNAZP19086 355 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GRK3P35626 688 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CCR8P51685 355 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GABREP78334 506 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 NFKB2Q00653 900 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ACY1Q03154 408 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TUBB3Q13509 450 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GPR19Q15760 415 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 DEFB110Q30KQ9 67 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ZC3H12BQ5HYM0 836 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CATSPEREQ5SY80 951 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 CYB5D1Q6P9G0 228 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PPP4R1Q8TF05 950 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 TLCD1Q96CP7 247 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 PLCD4Q9BRC7 762 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 ZNF446Q9NWS9 450 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 SLC39A1Q9NY26 324 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 GPRC5BQ9NZH0 403 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 COPG2Q9UBF2 871 aa13.9□□□□□ -0.18
TNFRSF1A-216ENST00000543995 A0A0J9YVX5 310 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 PMS2P1A4D2B8 440 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 OR2A25A4D2G3 310 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 E7EQ34 232 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 KATNA1O75449 491 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 SUPT7LO94864 414 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 ARL1P40616 181 aaPredicted RBP13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 PIK3CGP48736 1102 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 HERVK_113P63132 956 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 GTF2H2Q13888 395 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 GTF2H2CQ6P1K8 395 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 METTL2BQ6P1Q9 378 aaKnown RBP13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 GOLGA7Q7Z5G4 137 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 PAQR7Q86WK9 346 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 ATP6V1G3Q96LB4 118 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 SH3GL2Q99962 352 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 ERVK-6Q9BXR3 956 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 CHRNA10Q9GZZ6 450 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 POLR1BQ9H9Y6 1135 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 FGF21Q9NSA1 209 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 IRAK4Q9NWZ3 460 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 SIDT1Q9NXL6 827 aaKnown RBP13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 KLK4Q9Y5K2 254 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 AK5Q9Y6K8 562 aa13.9□□□□□ -0.19
TNFRSF1A-216ENST00000543995 KNTC1P50748 2209 aa13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 A0A1W2PNU3 283 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 B4E171 279 aa13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 TMEM150CB9EJG8 249 aa13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 E2F3O00716 465 aa13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 HAT1O14929 419 aa13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 POLR1CO15160 346 aaPredicted RBP13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 TM9SF1O15321 606 aa13.89□□□□□ -0.19
TNFRSF1A-216ENST00000543995 PRPF4O43172 522 aaKnown RBP eCLIP13.89□□□□□ -0.195e-7■■■■□ 24.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms