RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 PRDM8Q9NQV8 689 aa19.14■□□□□ 0.66
COPS7A-218ENST00000543939 IMP3Q9NV31 184 aaKnown RBP19.14■□□□□ 0.66
COPS7A-218ENST00000543939 VPS29Q9UBQ0 182 aa19.14■□□□□ 0.66
COPS7A-218ENST00000543939 L3MBTL1Q9Y468 752 aa19.14■□□□□ 0.66
COPS7A-218ENST00000543939 PDZK1P1A8MUH7 402 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 MAGEB17A8MXT2 336 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 PRAMEF26H0Y7S4 382 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 PCNAP12004 261 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 PCSK2P16519 638 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 XRCC1P18887 633 aaPredicted RBP19.14■□□□□ 0.65
COPS7A-218ENST00000543939 MAPK1P28482 360 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 FOXM1Q08050 763 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 LAPTM5Q13571 262 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 DDX39BQ13838 428 aaKnown RBP19.14■□□□□ 0.65
COPS7A-218ENST00000543939 C10orf62Q5T681 223 aaPredicted RBP19.14■□□□□ 0.65
COPS7A-218ENST00000543939 GPR153Q6NV75 609 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 PRMT9Q6P2P2 845 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 ABI3BPQ7Z7G0 1075 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 ADHFE1Q8IWW8 467 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 RNF148Q8N7C7 305 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 GLB1L3Q8NCI6 653 aaPredicted RBP19.14■□□□□ 0.65
COPS7A-218ENST00000543939 HUS1BQ8NHY5 278 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 NUDT8Q8WV74 236 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 SMPDL3AQ92484 453 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 TSACCQ96A04 125 aaPredicted RBP19.14■□□□□ 0.65
COPS7A-218ENST00000543939 LRRC58Q96CX6 371 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 METTL2AQ96IZ6 378 aaKnown RBP19.14■□□□□ 0.65
COPS7A-218ENST00000543939 ZBTB18Q99592 522 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 MVB12BQ9H7P6 319 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 IL1RL2Q9HB29 575 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 CD300AQ9UGN4 299 aa19.14■□□□□ 0.65
COPS7A-218ENST00000543939 PNMA8BQ9ULN7 279 aaPredicted RBP19.14■□□□□ 0.65
COPS7A-218ENST00000543939 A0A1W2PPV9 198 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 PIPSLA2A3N6 862 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 FAM170BA6NMN3 283 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 SDC1P18827 310 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 CD6P30203 668 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 CLDN8P56748 225 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 NFYCQ13952 458 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 RCN1Q15293 331 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 RPE65Q16518 533 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 Q6ZSR6 202 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 FAM9CQ8IZT9 166 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 DPP10Q8N608 796 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 DEFB123Q8N688 67 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 JADE3Q92613 823 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 SHDQ96IW2 340 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 APOLD1Q96LR9 279 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 FOXQ1Q9C009 403 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 PCBD2Q9H0N5 130 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 SPNS1Q9H2V7 528 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 CLMPQ9H6B4 373 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 SCHIP1Q9P0W5 487 aaPredicted RBP19.13■□□□□ 0.65
COPS7A-218ENST00000543939 ABCD2Q9UBJ2 740 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 DMTF1Q9Y222 760 aa19.13■□□□□ 0.65
COPS7A-218ENST00000543939 OR52A4PA6NMU1 304 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 CDH1P12830 882 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 SLC7A2P52569 658 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 DGKQP52824 942 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 MS4A2Q01362 244 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 HIST2H2ACQ16777 129 aaPredicted RBP19.12■□□□□ 0.65
COPS7A-218ENST00000543939 SAMD4BQ5PRF9 694 aaKnown RBP19.12■□□□□ 0.65
COPS7A-218ENST00000543939 HIST2H2AA3Q6FI13 130 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 NOXRED1Q6NXP6 359 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 ABRAXAS1Q6UWZ7 409 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 WASH2PQ6VEQ5 465 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 C17orf64Q86WR6 236 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 FAM129CQ86XR2 697 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 RAB42Q8N4Z0 105 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 KRTCAP2Q8N6L1 136 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 LINC01555Q8NAE3 123 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 BIRC7Q96CA5 298 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 C11orf24Q96F05 449 aaPredicted RBP19.12■□□□□ 0.65
COPS7A-218ENST00000543939 GPR174Q9BXC1 333 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 WASH6PQ9NQA3 447 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 TBC1D29Q9UFV1 150 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 TAC3Q9UHF0 121 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 FBXL21Q9UKT6 434 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 TSC22D4Q9Y3Q8 395 aa19.12■□□□□ 0.65
COPS7A-218ENST00000543939 PRORSD1PA6NEY8 169 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 FOXE1O00358 373 aaPredicted RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 MAP3K7O43318 606 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 FKBP6O75344 327 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 ETHE1O95571 254 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 NPPAP01160 153 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 MTHFD1P11586 935 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 SLC6A2P23975 617 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 TACR1P25103 407 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 PKLRP30613 574 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 MSX2P35548 267 aaPredicted RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 RABIFP47224 123 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 ERFP50548 548 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 SRP54P61011 504 aaKnown RBP19.11■□□□□ 0.65
COPS7A-218ENST00000543939 ZP2Q05996 745 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 ALG11Q2TAA5 492 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 AAGABQ6PD74 315 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 SLC2A7Q6PXP3 512 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 LPCAT2Q7L5N7 544 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 RD3Q7Z3Z2 195 aa19.11■□□□□ 0.65
COPS7A-218ENST00000543939 OR13H1Q8NG92 308 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms