RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 C1orf216Q8TAB5 229 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 FBXL8Q96CD0 374 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 CYP2S1Q96SQ9 504 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 TBCCD1Q9NVR7 557 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 RIMBP3CA6NJZ7 1639 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 RIMBP3BA6NNM3 1639 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 RIMBP3Q9UFD9 1639 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 PCP4L1A6NKN8 68 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ADAM15Q13444 863 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 TPGS2Q68CL5 300 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 PIM3Q86V86 326 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ZC3H3Q8IXZ2 948 aaKnown RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 ARMC10Q8N2F6 343 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ZNF615Q8N8J6 731 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 SLC22A18Q96BI1 424 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 TBX5Q99593 518 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ZSCAN5AQ9BUG6 496 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 SMOC2Q9H3U7 446 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 COPS7AQ9UBW8 275 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 A0A0G2JLL6 359 aaPredicted RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 M0QX08 132 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 GMFGO60234 142 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 TGFB1P01137 390 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 OPN1SWP03999 348 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 G6PDP11413 515 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 MLLT6P55198 1093 aaPredicted RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 CASP9P55211 416 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 RASGEF1BQ0VAM2 473 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 SLC13A2Q13183 592 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ZNF630Q2M218 657 aaPredicted RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 PRAMEF14Q5SWL7 426 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 KIAA1614Q5VZ46 1190 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 PRRT2Q7Z6L0 340 aaPredicted RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 OR2L3Q8NG85 312 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 HSPBAP1Q96EW2 488 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 GAL3ST4Q96RP7 486 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 POPDC3Q9HBV1 291 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 RNF6Q9Y252 685 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ASB3Q9Y575 518 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 CAMTA1Q9Y6Y1 1673 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ARL6IP5O75915 188 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 RCBTB2O95199 551 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ATF4P18848 351 aaPredicted RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 ASB18Q6ZVZ8 466 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 LYSMD3Q7Z3D4 306 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 C2CD4AQ8NCU7 369 aaPredicted RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 ATP6V1C2Q8NEY4 427 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 NUS1Q96E22 293 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 HSH2DQ96JZ2 352 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 ADAP2Q9NPF8 381 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 TRIM36Q9NQ86 728 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 STOX2Q9P2F5 926 aaPredicted RBP12.78□□□□□ -0.36
TNC-212ENST00000542877 CARD8Q9Y2G2 431 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 HS3ST4Q9Y661 456 aa12.78□□□□□ -0.36
TNC-212ENST00000542877 A0A1W2PRQ8 180 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 FGF3P11487 239 aaPredicted RBP12.77□□□□□ -0.36
TNC-212ENST00000542877 GLDCP23378 1020 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 MASP1P48740 699 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 IST1P53990 364 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 MEP1AQ16819 746 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 CLEC12AQ5QGZ9 265 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 SLC8B1Q6J4K2 584 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 CHADLQ6NUI6 762 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 PRSS55Q6UWB4 352 aaPredicted RBP12.77□□□□□ -0.36
TNC-212ENST00000542877 GDPD4Q6W3E5 623 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 CILP2Q8IUL8 1156 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 PQLC3Q8N755 202 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 ZNF676Q8N7Q3 588 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 DEFB118Q96PH6 123 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 PKP4Q99569 1192 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 CCM2Q9BSQ5 444 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 TOR3AQ9H497 397 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 GDAP2Q9NXN4 497 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 SEC14L4Q9UDX3 406 aa12.77□□□□□ -0.36
TNC-212ENST00000542877 KANTRA0A1W2PQU2 76 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 LOC730098B7Z3J9 87 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SEPT4O43236 478 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 STC1P52823 247 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 MAB21L1Q13394 359 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 DEFB115Q30KQ5 88 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SLC39A4Q6P5W5 647 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 MCEMP1Q8IX19 187 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ZBTB8BQ8NAP8 495 aaPredicted RBP12.77□□□□□ -0.37
TNC-212ENST00000542877 OR5T3Q8NGG3 340 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SIPA1Q96FS4 1042 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 FBXL20Q96IG2 436 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SUSD3Q96L08 255 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SLC30A2Q9BRI3 323 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 CCDC106Q9BWC9 280 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 MLXQ9UH92 298 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 SLC22A14Q9Y267 594 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 H0YAE9 185 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 J3KR12 359 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ITGB1P05556 798 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ELNP15502 786 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 ATP5A1P25705 553 aaKnown RBP12.77□□□□□ -0.37
TNC-212ENST00000542877 VLDLRP98155 873 aa12.77□□□□□ -0.37
TNC-212ENST00000542877 MC1RQ01726 317 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms