RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 LAYNQ6UX15 382 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NPSR1Q6W5P4 371 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MSANTD1Q6ZTZ1 278 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TMPRSS11FQ6ZWK6 438 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 EIF3MQ7L2H7 374 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 GDPD3Q7L5L3 318 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 HSD17B13Q7Z5P4 300 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CCDC71Q8IV32 467 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SPAG16Q8N0X2 631 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 PGAM4Q8N0Y7 254 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 METTL4Q8N3J2 472 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZCCHC9Q8N567 271 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 C12orf45Q8N5I9 185 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ATPAF2Q8N5M1 289 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SLC25A41Q8N5S1 370 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CDYL2Q8N8U2 506 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 BANPQ8N9N5 519 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RCBTB1Q8NDN9 531 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 DMBX1Q8NFW5 382 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 OR4M2Q8NGB6 313 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 OR6B3Q8NGW1 331 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 HUS1BQ8NHY5 278 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 DYNC2LI1Q8TCX1 351 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 RAET1EQ8TD07 263 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZFP90Q8TF47 636 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF384Q8TF68 577 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SFT2D1Q8WV19 159 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CPA5Q8WXQ8 436 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NSMAFQ92636 917 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 HTRA1Q92743 480 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 POP5Q969H6 163 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MUL1Q969V5 352 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TMBIM1Q969X1 311 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MYLPFQ96A32 169 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TMEM143Q96AN5 459 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NXNL1Q96CM4 212 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 VCPIP1Q96JH7 1222 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SLC45A3Q96JT2 553 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SERAC1Q96JX3 654 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZNF512Q96ME7 567 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 LBHD1Q9BQE6 289 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZSWIM1Q9BR11 485 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ORAI3Q9BRQ5 295 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 DUSP26Q9BV47 211 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ADI1Q9BV57 179 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TMED9Q9BVK6 235 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 C1QTNF1Q9BXJ1 281 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TRIM9Q9C026 710 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ZDHHC5Q9C0B5 715 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ILKAPQ9H0C8 392 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 UPF3AQ9H1J1 476 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MIXL1Q9H2W2 232 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 FAM83DQ9H4H8 585 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ANKRD19PQ9H560 264 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MVB12BQ9H7P6 319 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SEBOXQ9HB31 216 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 LRRC4Q9HBW1 653 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 VAT1LQ9HCJ6 419 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NT5MQ9NPB1 228 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NANSQ9NR45 359 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 FBXO6Q9NRD1 293 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TMOD3Q9NYL9 352 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CD274Q9NZQ7 290 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MED11Q9P086 117 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SPASTQ9UBP0 616 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 SCP2D1Q9UJQ7 156 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ANAPC7Q9UJX3 599 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 ING4Q9UNL4 249 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MAB21L2Q9Y586 359 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 PCDHA8Q9Y5H6 950 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 TIMM13Q9Y5L4 95 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 PSAT1Q9Y617 370 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 CDY1Q9Y6F8 540 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 COL15A1P39059 1388 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 NUP188Q5SRE5 1749 aa4.23□□□□□ -1.73
SNHG1-219ENST00000542112 COL5A2P05997 1499 aaPredicted RBP4.23□□□□□ -1.73
SNHG1-219ENST00000542112 FRMPD2Q68DX3 1309 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MYH10P35580 1976 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CICQ96RK0 1608 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 A0A0D9SFI3 127 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 BCLAF3A2AJT9 711 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 C7orf72A4D263 438 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ANKDD1BA6NHY2 528 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 MARCH11A6NNE9 402 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 FOXO6A8MYZ6 492 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 E7EWF7 191 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 H7C0S8 307 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 H7C1Q1 480 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 H7C4K7 107 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 DDX39AO00148 427 aaKnown RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 ARNTLO00327 626 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 PDHXO00330 501 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 WNT9AO14904 365 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TOX3O15405 576 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-219ENST00000542112 CLDN3O15551 220 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 SEC14L5O43304 696 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 TXNL1O43396 289 aa4.22□□□□□ -1.73
SNHG1-219ENST00000542112 AKR7A2O43488 359 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms