RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 ANKRD7Q92527 254 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 HIST1H2AHQ96KK5 128 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 HIST1H2AJQ99878 128 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 ZFYVE21Q9BQ24 234 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 H2AFJQ9BTM1 129 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 SEMA4CQ9C0C4 833 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 GPAMQ9HCL2 828 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 IRAK4Q9NWZ3 460 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 ARL15Q9NXU5 204 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 NOVA2Q9UNW9 492 aaKnown RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 SRPK3Q9UPE1 567 aa16.17■□□□□ 0.18
CD9-209ENST00000540891 FARSAQ9Y285 508 aaKnown RBP16.17■□□□□ 0.18
CD9-209ENST00000540891 RECKO95980 971 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 ENO2P09104 434 aaPredicted RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 RAB40ALP0C0E4 278 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 GMPRP36959 345 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 AP1S2P56377 157 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 VSX2P58304 361 aaPredicted RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 RPS15P62841 145 aaKnown RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 MC1RQ01726 317 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 NAE1Q13564 534 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 IL10RAQ13651 578 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 LY6DQ14210 128 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 NCF4Q15080 339 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 TAF1BQ53T94 588 aaPredicted RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 TCTE1Q5JU00 501 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 WASHC2DQ5SRD0 308 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 THEMIS2Q5TEJ8 643 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 FAM69BQ5VUD6 431 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 PRAMEF13Q5VWM6 474 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 SPATA6LQ8N4H0 392 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 ENDOVQ8N8Q3 282 aaKnown RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 EXD3Q8N9H8 876 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 OR56A3Q8NH54 315 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 SLC39A7Q92504 469 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 FBXL8Q96CD0 374 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 MED8Q96G25 268 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 OR2A5Q96R48 311 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 FMO2Q99518 471 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 DPH2Q9BQC3 489 aaPredicted RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 NDC1Q9BTX1 674 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 FUT8Q9BYC5 575 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 NLNQ9BYT8 704 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 UNKQ9C0B0 810 aaKnown RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 CDC42EP4Q9H3Q1 356 aaKnown RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 SLC22A11Q9NSA0 550 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 UTP6Q9NYH9 597 aaKnown RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 SMG1Q96Q15 3661 aaKnown RBP16.16■□□□□ 0.18
CD9-209ENST00000540891 PCM1Q15154 2024 aa16.16■□□□□ 0.18
CD9-209ENST00000540891 CACNA1GO43497 2377 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 H0YGG7 62 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 H7BY64 318 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 HAT1O14929 419 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 GUCA1CO95843 209 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 PRB1P04280 392 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 AGXTP21549 392 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 SPRP35270 261 aaPredicted RBP16.15■□□□□ 0.18
CD9-209ENST00000540891 SLC12A2P55011 1212 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 ARF3P61204 181 aaPredicted RBP16.15■□□□□ 0.18
CD9-209ENST00000540891 RELAQ04206 551 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 NAB1Q13506 487 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 GRM7Q14831 915 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 TSNQ15631 228 aaKnown RBP16.15■□□□□ 0.18
CD9-209ENST00000540891 PRTGQ2VWP7 1150 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 TTLL10Q6ZVT0 673 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 SYVN1Q86TM6 617 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 PLD3Q8IV08 490 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 DTWD1Q8N5C7 304 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 PYCR2Q96C36 320 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 TSPAN17Q96FV3 270 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 PRAP1Q96NZ9 151 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 CATSPER2Q96P56 530 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 OR4K3Q96R72 315 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 TRIM54Q9BYV2 358 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 FAM117AQ9C073 453 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 DERL2Q9GZP9 239 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 CUTCQ9NTM9 273 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 TXLNGQ9NUQ3 528 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 SNX7Q9UNH6 387 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 OARD1Q9Y530 152 aa16.15■□□□□ 0.18
CD9-209ENST00000540891 A0A1B0GX78 115 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 HMX2A2RU54 273 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 CDC14CA4D256 554 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 TK2O00142 265 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 CNOT3O75175 753 aaKnown RBP16.14■□□□□ 0.17
CD9-209ENST00000540891 C1QL1O75973 258 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 ONECUT2O95948 504 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 CD1DP15813 335 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 NPPBP16860 134 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 STMN1P16949 149 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 ARSFP54793 590 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 RAB10P61026 200 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 CSNK1G2P78368 415 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 DCDP81605 110 aaKnown RBP16.14■□□□□ 0.17
CD9-209ENST00000540891 DEFB109BQ30KR1 87 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 NKAIN1Q4KMZ8 207 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 YOD1Q5VVQ6 348 aaPredicted RBP16.14■□□□□ 0.17
CD9-209ENST00000540891 BORAQ6PGQ7 559 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 LCTLQ6UWM7 567 aa16.14■□□□□ 0.17
CD9-209ENST00000540891 CEP128Q6ZU80 1094 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms