RNA–Protein interactions for RNA: ENST00000540849.5

PRICKLE3-205, Transcript of prickle planar cell polarity protein 3, humanhuman

TSL 2

Gene PRICKLE3, Length 2,246 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3-205ENST00000540849 TTC29Q8NA56 475 aaPredicted RBP12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 VOPP1Q96AW1 172 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 TRMT2BQ96GJ1 504 aaKnown RBP12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 HSH2DQ96JZ2 352 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 DPH2Q9BQC3 489 aaPredicted RBP12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 SCN3BQ9NY72 215 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 NDRG4Q9ULP0 352 aaKnown RBP12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 CLEC4EQ9ULY5 219 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 BRCA2P51587 3418 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 TMEM247A6NEH6 219 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 M0R3G1 203 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 CLIC1O00299 241 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 FAM20BO75063 409 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 KCNK5O95279 499 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 BMP4P12644 408 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 ITPKAP23677 461 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 KRT20P35900 424 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 WNT3P56703 355 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 CXCR4P61073 352 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 NCS1P62166 190 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 CD300CQ08708 224 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 DGCR6Q14129 220 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 VEPH1Q14D04 833 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 UGT8Q16880 541 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 LRRC66Q68CR7 880 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 CYP2U1Q7Z449 544 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 HORMAD1Q86X24 394 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 ZNF461Q8TAF7 563 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 DYNC2LI1Q8TCX1 351 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 FCRL1Q96LA6 429 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 COPS8Q99627 209 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 SLC12A9Q9BXP2 914 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 SIRT5Q9NXA8 310 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 ERVK-11Q9UQG0 969 aa12.89□□□□□ -0.35
PRICKLE3-205ENST00000540849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 PABPN1LA6NDY0 278 aaKnown RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 TMEM221A6NGB7 291 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 UPK3BL1B0FP48 263 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 UPK3BL2E5RIL1 263 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 NPIPB8E9PQR5 432 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 EIF3FO00303 357 aaPredicted RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 PARNO95453 639 aaKnown RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 IGSF6O95976 241 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 HIST1H2AGP0C0S8 130 aaPredicted RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 HIST1H2ADP20671 130 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 SERPINA4P29622 427 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 KDELR2P33947 212 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 TM4SF4P48230 202 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 TRPC1P48995 793 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ALDH7A1P49419 539 aaKnown RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 RPS3AP61247 264 aaKnown RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 HSPA14Q0VDF9 509 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 DGKKQ5KSL6 1271 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ARL14EPQ8N8R7 260 aaPredicted RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ZNF540Q8NDQ6 660 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 SKA2Q8WVK7 121 aaPredicted RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 S100ZQ8WXG8 99 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 HIST1H2AHQ96KK5 128 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 PANX1Q96RD7 426 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 HIST1H2AJQ99878 128 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 APOL4Q9BPW4 351 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 TSEN34Q9BSV6 310 aaKnown RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 H2AFJQ9BTM1 129 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ACOT13Q9NPJ3 140 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 RPS6KA6Q9UK32 745 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 SAMHD1Q9Y3Z3 626 aaKnown RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 RGS10O43665 173 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 SCN2BO60939 215 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ABLIM3O94929 683 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 EPN2O95208 641 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 C8GP07360 202 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 OR56A5P0C7T3 313 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ACPPP15309 386 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 LHCGRP22888 699 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 TGFBR1P36897 503 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 RXRGP48443 463 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 HNMTP50135 292 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 LMAN2Q12907 356 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 DGUOKQ16854 277 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 FRG2Q64ET8 278 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 EIF3MQ7L2H7 374 aaKnown RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ADCK1Q86TW2 530 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 SYT12Q8IV01 421 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 RNF168Q8IYW5 571 aaPredicted RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 CLECL1Q8IZS7 167 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 OR6Q1Q8NGQ2 317 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 UBE2FQ969M7 185 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ASIC4Q96FT7 647 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 FRG2BQ96QU4 278 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 LYSMD1Q96S90 227 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 ZNF334Q9HCZ1 680 aaPredicted RBP12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 PCDH12Q9NPG4 1184 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 NMRK2Q9NPI5 230 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 FBXO8Q9NRD0 319 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 KRT84Q9NSB2 600 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 DNAJC11Q9NVH1 559 aa12.88□□□□□ -0.35
PRICKLE3-205ENST00000540849 KIF17Q9P2E2 1029 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms