RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	SLC7A4	O43246	635 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MAFK	O60675	156 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SOCS5	O75159	536 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	S1PR4	O95977	384 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CHEK2	O96017	543 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CDH1	P12830	882 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MTHFD2	P13995	350 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD1D	P15813	335 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD86	P42081	329 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZFP36L2	P47974	494 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARRB1	P49407	418 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DGUOK	Q16854	277 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SYT16	Q17RD7	645 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TTLL9	Q3SXZ7	439 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAM98B	Q52LJ0	330 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LYPLAL1	Q5VWZ2	237 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TTC23	Q5W5X9	447 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MRNIP	Q6NTE8	343 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARMC6	Q6NXE6	501 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ZNF549	Q6P9A3	640 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARMC8	Q8IUR7	673 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ARHGAP12	Q8IWW6	846 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRIM48	Q8IWZ4	208 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SYTL1	Q8IYJ3	562 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CDYL2	Q8N8U2	506 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PAPD5	Q8NDF8	572 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR6Q1	Q8NGQ2	317 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR13J1	Q8NGT2	312 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	OR10A6	Q8NH74	314 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	FAR1	Q8WVX9	515 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	VWCE	Q96DN2	955 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TSPAN17	Q96FV3	270 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HMCES	Q96FZ2	354 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TRMO	Q9BU70	441 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NUSAP1	Q9BXS6	441 aa	Known RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	C6orf62	Q9GZU0	229 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MRGBP	Q9NV56	204 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KLHL3	Q9UH77	587 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LEF1	Q9UJU2	399 aa	Predicted RBP	5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MMP17	Q9ULZ9	603 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BOLA1	Q9Y3E2	137 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	COL4A6	Q14031	1691 aa		5.52	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANK1	P16157	1881 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	LOC100130705	A0A1B0GUX0	176 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DRGX	A6NNA5	263 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CDC7	O00311	574 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRMT5	O14744	637 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TSPAN6	O43657	245 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DFNA5	O60443	496 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	GUCY1B2	O75343	617 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NDUFS3	O75489	264 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRKD3	O94806	890 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRSS23	O95084	383 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KRT75	O95678	551 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANXA6	P08133	673 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ALOX5	P09917	674 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SDHB	P21912	280 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	CD40LG	P29965	261 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ADRA1A	P35348	466 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SERPINH1	P50454	418 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PTPN5	P54829	565 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DLX2	Q07687	328 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SERINC3	Q13530	473 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RAPSN	Q13702	412 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	IHH	Q14623	411 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TSN	Q15631	228 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NPTX1	Q15818	432 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RBBP7	Q16576	425 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	HNRNPA1L2	Q32P51	320 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ATP6AP1L	Q52LC2	224 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KANK2	Q63ZY3	851 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RANBP10	Q6VN20	620 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BNIPL	Q7Z465	357 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PTRH1	Q86Y79	214 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	TTC30B	Q8N4P2	665 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RPLP0P6	Q8NHW5	317 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BLOC1S5	Q8TDH9	187 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SKA2	Q8WVK7	121 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NCLN	Q969V3	563 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ULK4	Q96C45	1275 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	L3HYPDH	Q96EM0	354 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	BARD1	Q99728	777 aa	Known RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SLC25A51	Q9H1U9	297 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	SUV39H2	Q9H5I1	410 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RASSF1	Q9NS23	344 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ADGRE2	Q9UHX3	823 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ASB1	Q9Y576	335 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ANHX	E9PGG2	379 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	INSIG1	O15503	277 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PRAMEF11	O60813	436 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	KCNK2	O95069	426 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	NDST3	O95803	873 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	RAP2A	P10114	183 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	UMPS	P11172	480 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	PCMT1	P22061	227 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	MZF1	P28698	734 aa	Predicted RBP	5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	POLD2	P49005	469 aa		5.51	□□□□□ -1.53
RAPGEF4-215	ENST00000540783	ISL1	P61371	349 aa		5.51	□□□□□ -1.53

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