RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 LOC105371242A0A075B767 164 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 A0A087WUV0 522 aaPredicted RBP2.95□□□□□ -1.94
MDM2-227ENST00000540709 IGKV3-15P01624 115 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 DNAH10OSP0CZ25 163 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 CASP2P42575 452 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 LMAN1P49257 510 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 CLCN4P51793 760 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 UBXN2AP68543 259 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 DHODHQ02127 395 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 FCHO2Q0JRZ9 810 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 CUL4AQ13619 759 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 PTPN14Q15678 1187 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 CBWD6Q4V339 395 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 HIGD2BQ4VC39 106 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 CBWD3Q5JTY5 395 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 MZT2BQ6NZ67 158 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 LCLAT1Q6UWP7 414 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 GDPGP1Q6ZNW5 385 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 SLC25A42Q86VD7 318 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 SLC47A2Q86VL8 602 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 OR10Q1Q8NGQ4 319 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 C9orf43Q8TAL5 461 aaPredicted RBP2.95□□□□□ -1.94
MDM2-227ENST00000540709 LRRC15Q8TF66 581 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 PRPF31Q8WWY3 499 aaKnown RBP2.95□□□□□ -1.94
MDM2-227ENST00000540709 NSUN4Q96CB9 384 aaKnown RBP2.95□□□□□ -1.94
MDM2-227ENST00000540709 TMCO6Q96DC7 493 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 FAM71F1Q96KD3 344 aaPredicted RBP2.95□□□□□ -1.94
MDM2-227ENST00000540709 UBA5Q9GZZ9 404 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 CCDC68Q9H2F9 335 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 HEXA-AS1Q9H8Q6 139 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.95□□□□□ -1.94
MDM2-227ENST00000540709 CPSF2Q9P2I0 782 aaKnown RBP2.95□□□□□ -1.94
MDM2-227ENST00000540709 WDR83OSQ9Y284 106 aa2.95□□□□□ -1.94
MDM2-227ENST00000540709 TRBV4-1A0A0J9YWV2 114 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 A0A1W2PPR1 153 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 H0YAE9 185 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 TEX28O15482 410 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 DANCRP0C864 163 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 HNRNPKP61978 463 aaKnown RBP eCLIP2.94□□□□□ -1.94
MDM2-227ENST00000540709 TRAP1Q12931 704 aaKnown RBP2.94□□□□□ -1.94
MDM2-227ENST00000540709 SGCGQ13326 291 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 LEKR1Q6ZMV7 388 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 CDHR3Q6ZTQ4 885 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 DNAAF5Q86Y56 855 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 NDUFAF2Q8N183 169 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 SLC4A11Q8NBS3 891 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 C17orf47Q8NEP4 570 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 OR10S1Q8NGN2 331 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 TEKT4Q8WW24 435 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 METTL21AQ8WXB1 218 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 TOMM40LQ969M1 308 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 C2orf48Q96LS8 159 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 LGMNQ99538 433 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 UBAC1Q9BSL1 405 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 MXD3Q9BW11 206 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 MRPL1Q9BYD6 325 aaKnown RBP2.94□□□□□ -1.94
MDM2-227ENST00000540709 KLHL4Q9C0H6 718 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 MTMR12Q9C0I1 747 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 HOXD1Q9GZZ0 328 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 PDE7BQ9NP56 450 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 NSMCE4AQ9NXX6 385 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 HAO2Q9NYQ3 351 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 RPS6KL1Q9Y6S9 549 aa2.94□□□□□ -1.94
MDM2-227ENST00000540709 SRRM5B3KS81 715 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 BEST1O76090 585 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 ATP1B1P05026 303 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 LINGO3P0C6S8 592 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 GP9P14770 177 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 PORP16435 677 aaPredicted RBP2.93□□□□□ -1.94
MDM2-227ENST00000540709 AZGP1P25311 298 aaKnown RBP2.93□□□□□ -1.94
MDM2-227ENST00000540709 ELAVL4P26378 380 aaKnown RBP2.93□□□□□ -1.94
MDM2-227ENST00000540709 CD27P26842 260 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 ALDH1B1P30837 517 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 ACTN2P35609 894 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 STK4Q13043 487 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 PRKG2Q13237 762 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 TRIM29Q14134 588 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 TAB1Q15750 504 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 GPR33Q49SQ1 333 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 GARNL3Q5VVW2 1013 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 SPATA1Q5VX52 437 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 OR4A47Q6IF82 309 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 ZNF841Q6ZN19 808 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 OR4N5Q8IXE1 308 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 OR5T2Q8NGG2 359 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 NPRL2Q8WTW4 380 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 KCNE4Q8WWG9 221 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 GCNAQ96QF7 691 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 ABHD1Q96SE0 405 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 CCDC106Q9BWC9 280 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 GNB4Q9HAV0 340 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 GDE1Q9NZC3 331 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 DDX25Q9UHL0 483 aaKnown RBP2.93□□□□□ -1.94
MDM2-227ENST00000540709 LNPEPQ9UIQ6 1025 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 WIPI2Q9Y4P8 454 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 SELENOKQ9Y6D0 94 aa2.93□□□□□ -1.94
MDM2-227ENST00000540709 SHISA9B4DS77 424 aa2.92□□□□□ -1.94
MDM2-227ENST00000540709 ACSL3O95573 720 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms