RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 HNRNPA2B1P22626 353 aaKnown RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 ACADLP28330 430 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PREPP48147 710 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 C10orf62Q5T681 223 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 Q6ZNX1 250 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 TICAM1Q8IUC6 712 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 METTL25Q8N6Q8 603 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 OR4F6Q8NGB9 312 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 MCOLN3Q8TDD5 553 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 ITPKCQ96DU7 683 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PPP1R36Q96LQ0 422 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 AKTIPQ9H8T0 292 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 PHPT1Q9NRX4 125 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 TUBA8Q9NY65 449 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 INVSQ9Y283 1065 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 PCYT1BQ9Y5K3 369 aaPredicted RBP8.58□□□□□ -1.04
DDB1-213ENST00000539332 CEPT1Q9Y6K0 416 aa8.58□□□□□ -1.04
DDB1-213ENST00000539332 DNAH14Q0VDD8 3507 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 TP53BP1Q12888 1972 aaPredicted RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 KCNE1BA0A087WTH5 132 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 H0Y8X5 98 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 GIPC1O14908 333 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 UBDO15205 165 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 NDUFS2O75306 463 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 KATNA1O75449 491 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 BPNT1O95861 308 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 CHEK2O96017 543 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 C8BP07358 591 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 HOXC4P09017 264 aaPredicted RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 HIST1H2AGP0C0S8 130 aaPredicted RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 ZNF12P17014 697 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 HIST1H2ADP20671 130 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 PDHA2P29803 388 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 SLC5A2P31639 672 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 CLDN2P57739 230 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 DMPKQ09013 629 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 DMWDQ09019 674 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 E2F2Q14209 437 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 USP39Q53GS9 565 aaKnown RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 NXNQ6DKJ4 435 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 TSSK4Q6SA08 328 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 POU5F2Q8N7G0 328 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 L3MBTL4Q8NA19 623 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 TMEM145Q8NBT3 493 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 TSPAN14Q8NG11 270 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 OR56A3Q8NH54 315 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 ATL1Q8WXF7 558 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 ABTB1Q969K4 478 aaPredicted RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 CCDC124Q96CT7 223 aaKnown RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 SCARF2Q96GP6 870 aaPredicted RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 HIST1H2AHQ96KK5 128 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 BMFQ96LC9 184 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 CCDC138Q96M89 665 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 HIST1H2AJQ99878 128 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 H2AFJQ9BTM1 129 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 PCED1AQ9H1Q7 454 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 OR52A5Q9H2C5 316 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 PFDN4Q9NQP4 134 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 PRMT8Q9NR22 394 aaPredicted RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 DDX18Q9NVP1 670 aaKnown RBP8.57□□□□□ -1.04
DDB1-213ENST00000539332 CA5BQ9Y2D0 317 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 TMEM98Q9Y2Y6 226 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 CCL27Q9Y4X3 112 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 TIMM22Q9Y584 194 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 PTGDR2Q9Y5Y4 395 aa8.57□□□□□ -1.04
DDB1-213ENST00000539332 ZNF318Q5VUA4 2279 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 CCDC163A0A0D9SF12 145 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 SERTM1A2A2V5 107 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 NPIPB8E9PQR5 432 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PRAMEF26H0Y7S4 382 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 H3BM21 787 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 FPGTO14772 594 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 UGDHO60701 494 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 POP7O75817 140 aaKnown RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 CAPN1P07384 714 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 HGFP14210 728 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 EPB42P16452 691 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 LBPP18428 481 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PBLDP30039 288 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 AKT2P31751 481 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TTKP33981 857 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 NUDT1P36639 197 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 GDF5P43026 501 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ALDH3B2P48448 385 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 HTR6P50406 440 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PFN3P60673 137 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 ESRRGP62508 458 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 TXNL4AP83876 142 aaKnown RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 MYBPC1Q00872 1141 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 RPL6Q02878 288 aaKnown RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 GRB7Q14451 532 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 SMU1Q2TAY7 513 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 PTCHD3Q3KNS1 767 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 KLHL35Q6PF15 583 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 DOK6Q6PKX4 331 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 UNC5DQ6UXZ4 953 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 BNC2Q6ZN30 1099 aaPredicted RBP8.56□□□□□ -1.04
DDB1-213ENST00000539332 GCNT7Q6ZNI0 430 aa8.56□□□□□ -1.04
DDB1-213ENST00000539332 FAM83HQ6ZRV2 1179 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms