RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 TAC3Q9UHF0 121 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 KCND3Q9UK17 655 aa13.13□□□□□ -0.31
CD9-208ENST00000538834 MRPS18BQ9Y676 258 aaKnown RBP13.13□□□□□ -0.31
CD9-208ENST00000538834 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 LOC102723532A0A0G2JNH3 316 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 CDC7O00311 574 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 ZSCAN9O15535 394 aaPredicted RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 CREG1O75629 220 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 KLF7O75840 302 aaPredicted RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 MED26O95402 600 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 CCND1P24385 295 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 HRH2P25021 359 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 PTPN4P29074 926 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 RPA3P35244 121 aaPredicted RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 SPRP35270 261 aaPredicted RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 SLC26A3P40879 764 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 TBPL1P62380 186 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 CYP4F2P78329 520 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 EFTUD2Q15029 972 aaKnown RBP eCLIP13.12□□□□□ -0.31
CD9-208ENST00000538834 TBR1Q16650 682 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 CDKL4Q5MAI5 379 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 MRPL14Q6P1L8 145 aaKnown RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 SYTL1Q8IYJ3 562 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 GPR135Q8IZ08 494 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 PPM1NQ8N819 430 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 ABHD11Q8NFV4 315 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 STARD8Q92502 1023 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 ISL2Q96A47 359 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 KIAA1143Q96AT1 154 aaPredicted RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 FMO2Q99518 471 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 ZFYVE21Q9BQ24 234 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 ACAT2Q9BWD1 397 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 PCBD2Q9H0N5 130 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 CAB39LQ9H9S4 337 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 TMEM184CQ9NVA4 438 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 CUEDC1Q9NWM3 386 aaPredicted RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 MTRF1LQ9UGC7 380 aaKnown RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 SNX7Q9UNH6 387 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 SRPK3Q9UPE1 567 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 SH2B3Q9UQQ2 575 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 FARSAQ9Y285 508 aaKnown RBP13.12□□□□□ -0.31
CD9-208ENST00000538834 OARD1Q9Y530 152 aa13.12□□□□□ -0.31
CD9-208ENST00000538834 ZNF500O60304 480 aaPredicted RBP13.11□□□□□ -0.31
CD9-208ENST00000538834 CNOT3O75175 753 aaKnown RBP13.11□□□□□ -0.31
CD9-208ENST00000538834 CCNDBP1O95273 360 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 KLK3P07288 261 aaPredicted RBP13.11□□□□□ -0.31
CD9-208ENST00000538834 SLC35E2BP0CK96 405 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 EZRP15311 586 aaKnown RBP13.11□□□□□ -0.31
CD9-208ENST00000538834 CD1DP15813 335 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 GGT5P36269 586 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 MAGEA12P43365 314 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 KCNC1P48547 511 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 ARSFP54793 590 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 RAB10P61026 200 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 CSNK1G2P78368 415 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 MC1RQ01726 317 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 CDC20Q12834 499 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 DLG1Q12959 904 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 ZNF655Q8N720 491 aaPredicted RBP13.11□□□□□ -0.31
CD9-208ENST00000538834 EXD3Q8N9H8 876 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 ZSCAN1Q8NBB4 408 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 SLC44A1Q8WWI5 657 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 TM4SF19Q96DZ7 209 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 CATSPER2Q96P56 530 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 CYTH2Q99418 400 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 SLC26A1Q9H2B4 701 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 GPAMQ9HCL2 828 aa13.11□□□□□ -0.31
CD9-208ENST00000538834 CCDC177Q9NQR7 707 aaPredicted RBP13.11□□□□□ -0.31
CD9-208ENST00000538834 H0YGG7 62 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 DSCR3O14972 297 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 PHGDHO43175 533 aaKnown RBP13.1□□□□□ -0.31
CD9-208ENST00000538834 SYF2O95926 243 aaKnown RBP13.1□□□□□ -0.31
CD9-208ENST00000538834 STMN1P16949 149 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 SLC6A12P48065 614 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 ARF3P61204 181 aaPredicted RBP13.1□□□□□ -0.31
CD9-208ENST00000538834 NAE1Q13564 534 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 E2F2Q14209 437 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 USP10Q14694 798 aaKnown RBP13.1□□□□□ -0.31
CD9-208ENST00000538834 TSNQ15631 228 aaKnown RBP13.1□□□□□ -0.31
CD9-208ENST00000538834 UGT8Q16880 541 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 WASHC2DQ5SRD0 308 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 PRAMEF13Q5VWM6 474 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 COX15Q7KZN9 410 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 VN1R4Q7Z5H5 301 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 ADAMTSL2Q86TH1 951 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 SYVN1Q86TM6 617 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 ISCA2Q86U28 154 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 ATL1Q8WXF7 558 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 MR1Q95460 341 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 KIAA1191Q96A73 305 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 PTERQ96BW5 349 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 RHBDF1Q96CC6 855 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 CLIP3Q96DZ5 547 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 TSPAN17Q96FV3 270 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 C10orf90Q96M02 699 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 SELENOSQ9BQE4 189 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 DHRS4Q9BTZ2 278 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 ATG10Q9H0Y0 220 aa13.1□□□□□ -0.31
CD9-208ENST00000538834 EPB41L4BQ9H329 900 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms