RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CDH1P12830 882 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 ATP6V1C1P21283 382 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 SDE2Q6IQ49 451 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 LRRC56Q8IYG6 542 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 CCL4L1Q8NHW4 92 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 MIEF2Q96C03 454 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 LINC00615Q96LM1 132 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 KCTD14Q9BQ13 255 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 EPS15L1Q9UBC2 864 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 TAC3Q9UHF0 121 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 PNMA8BQ9ULN7 279 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 PRSS51A0A1B0GVH4 220 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 NDUFV2P19404 249 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 GTF2A1P52655 376 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 PNLIPRP1P54315 467 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 GRIK2Q13002 908 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 SLC14A1Q13336 389 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 MLF2Q15773 248 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 CAPN13Q6MZZ7 669 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 METTL2BQ6P1Q9 378 aaKnown RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 OR10Q1Q8NGQ4 319 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 OR10A6Q8NH74 314 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 C12orf66Q96MD2 445 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 GABRG3Q99928 467 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 TEX101Q9BY14 249 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 CLMPQ9H6B4 373 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 FGF22Q9HCT0 170 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 PRDM8Q9NQV8 689 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
ACTN1-205ENST00000538545 VPS29Q9UBQ0 182 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 SUFUQ9UMX1 484 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 PCDHGB4Q9UN71 923 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 AP4S1Q9Y587 144 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 PCDHGB5Q9Y5G0 923 aa13.64□□□□□ -0.23
ACTN1-205ENST00000538545 FEZF1A0PJY2 475 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 PLRG1O43660 514 aaKnown RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 CEACAM5P06731 702 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 AK4P27144 223 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 TRIM23P36406 574 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 CASP9P55211 416 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 RHDQ02161 417 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 CLCA4Q14CN2 919 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 NRF1Q16656 503 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 HKDC1Q2TB90 917 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 TMEM259Q4ZIN3 620 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 LIPJQ5W064 366 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 ANO7Q6IWH7 933 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 HMBOX1Q6NT76 420 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 PDZD3Q86UT5 571 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 ICA1LQ8NDH6 482 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 HMGB4Q8WW32 186 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 ATL1Q8WXF7 558 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 PPWD1Q96BP3 646 aaKnown RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 LRGUKQ96M69 825 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 INSM2Q96T92 566 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 SEPHS2Q99611 448 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 THUMPD3Q9BV44 507 aaKnown RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 AP1G1O43747 822 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 EML2O95834 649 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 CKMT2P17540 419 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 RPS21P63220 83 aaKnown RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 MTX3Q5HYI7 312 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 METRNLQ641Q3 311 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 HID1Q8IV36 788 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 CLECL1Q8IZS7 167 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 MMP21Q8N119 569 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 N4BP2L2Q92802 583 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 PDXPQ96GD0 296 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 ZNF514Q96K75 400 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 C1QTNF2Q9BXJ5 285 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 RPF2Q9H7B2 306 aaKnown RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 LMCD1Q9NZU5 365 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 PCDHB14Q9Y5E9 798 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 SCN3AQ9NY46 2000 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 C17orf113A0A1B0GUU1 675 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 EME2A4GXA9 379 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 TXNDC9O14530 226 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 UBTFL6P0CB48 400 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 HRH2P25021 359 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 RAE1P78406 368 aaKnown RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 GRHL2Q6ISB3 625 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 SYT12Q8IV01 421 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 TMEM102Q8N9M5 508 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 PNPT1Q8TCS8 783 aaKnown RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 CMTM7Q96FZ5 175 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 ZBTB18Q99592 522 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 MACROD1Q9BQ69 325 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 DPEP2Q9H4A9 486 aa13.63□□□□□ -0.23
ACTN1-205ENST00000538545 SCHIP1Q9P0W5 487 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-205ENST00000538545 TCRBV21S2A2A0A5A6 115 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 TCRBV3S1A0A5B6 114 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 MC1RQ01726 317 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 ACSM2AQ08AH3 577 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 GK3PQ14409 553 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 ACSM2BQ68CK6 577 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 GCNT7Q6ZNI0 430 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 LINC01555Q8NAE3 123 aa13.62□□□□□ -0.23
ACTN1-205ENST00000538545 TSACCQ96A04 125 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-205ENST00000538545 FERD3LQ96RJ6 166 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms