RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 MED9Q9NWA0 146 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 ASIC5Q9NY37 505 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 CNOT2Q9NZN8 540 aaKnown RBP6.52□□□□□ -1.37
USP28-207ENST00000538475 ADGRE2Q9UHX3 823 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 PSORS1C1Q9UIG5 152 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 TBC1D24Q9ULP9 559 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 SAMD4AQ9UPU9 718 aaKnown RBP6.52□□□□□ -1.37
USP28-207ENST00000538475 AFG3L2Q9Y4W6 797 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 FKBP7Q9Y680 259 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 STON1Q9Y6Q2 735 aa6.52□□□□□ -1.37
USP28-207ENST00000538475 COL4A4P53420 1690 aaPredicted RBP6.52□□□□□ -1.37
USP28-207ENST00000538475 TRPM7Q96QT4 1865 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 MYO16Q9Y6X6 1858 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 PLXNB2O15031 1838 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 IGKV6-21A0A0C4DH24 114 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 A0A0G2JMP0 313 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 A0A1W2PQ67 120 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 E2F8A0AVK6 867 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ASPDHA6ND91 283 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 EFCAB10A6NFE3 127 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 OR6C70A6NIJ9 312 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 A6NL46 340 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CLCA1A8K7I4 914 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 NT5C1B-RDH14C9J2C7 533 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CXCR6O00574 342 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 UBFD1O14562 309 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 PLD2O14939 933 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 XPNPEP2O43895 674 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 KLK8O60259 260 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 SLC43A1O75387 559 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ERN1O75460 977 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 TGM6O95932 706 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 PRLP01236 227 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 HLA-DQB1P01920 261 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 PRNPP04156 253 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 IL6P05231 212 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 DBTP11182 482 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 PSKH1P11801 424 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ODC1P11926 461 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 NCK1P16333 377 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CYP3A5P20815 502 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 C4BPBP20851 252 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 WARSP23381 471 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 GADD45AP24522 165 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TNFSF8P32971 234 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 SLC1A2P43004 574 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 MAP2K4P45985 399 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 RFX2P48378 723 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 GMPSP49915 693 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 CLCN3P51790 818 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 SOX10P56693 466 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 DSTNP60981 165 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 RPS26P62854 115 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 CCNA1P78396 465 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 RUNX1T1Q06455 604 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ABRQ12979 859 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CSTF3Q12996 717 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 GRB7Q14451 532 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 GBX1Q14549 363 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 MFSD13AQ14CX5 517 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TAF1CQ15572 869 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 TSC22D1Q15714 1073 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 SHROOM1Q2M3G4 852 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 COL28A1Q2UY09 1125 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TTLL9Q3SXZ7 439 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ATP6AP1LQ52LC2 224 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 KLHL12Q53G59 568 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 PYCR3Q53H96 274 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 INO80DQ53TQ3 878 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 PAGE3Q5JUK9 113 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CLLU1Q5K131 121 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ATF7IP2Q5U623 682 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 DCAF15Q66K64 600 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 BICRALQ6AI39 1079 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 METTL2BQ6P1Q9 378 aaKnown RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 FAHD1Q6P587 224 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ERICH5Q6P6B1 374 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ZNF549Q6P9A3 640 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 LRFN4Q6PJG9 635 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CYP20A1Q6UW02 462 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 HSDL2Q6YN16 418 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TMPRSS11AQ6ZMR5 421 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 DET1Q7L5Y6 550 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 DPP9Q86TI2 863 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ZSWIM9Q86XI8 627 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ADGRG3Q86Y34 549 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 P3H2Q8IVL5 708 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CRYBG2Q8N1P7 616 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 GHDCQ8N2G8 530 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 C2orf69Q8N8R5 385 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 CDYL2Q8N8U2 506 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TTC29Q8NA56 475 aaPredicted RBP6.51□□□□□ -1.37
USP28-207ENST00000538475 GPR150Q8NGU9 434 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 STAG3L4Q8TBR4 150 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 SGCDQ92629 289 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 TMEM143Q96AN5 459 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 RHBDF1Q96CC6 855 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 PLPPR2Q96GM1 343 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 PYURFQ96I23 114 aa6.51□□□□□ -1.37
USP28-207ENST00000538475 ZSWIM3Q96MP5 696 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms