RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MRPS2Q9Y399 296 aaKnown RBP12.56□□□□□ -0.4
CHFR-216ENST00000538235 PCDHB11Q9Y5F2 797 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 PCDHGA7Q9Y5G6 932 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 ITPR1Q14643 2758 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 LOC400499M0QZD8 3231 aa12.56□□□□□ -0.4
CHFR-216ENST00000538235 URB1O60287 2271 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 A0A1B0GTL3 188 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 TMEM150CB9EJG8 249 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 SIX3O95343 332 aaPredicted RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 CNTFP26441 200 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 RPA3P35244 121 aaPredicted RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 SLC26A3P40879 764 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 FOXL2P58012 376 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 CSNK1G2P78368 415 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 PRDX1Q06830 199 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 ILF2Q12905 390 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 RASA2Q15283 850 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 TAF1BQ53T94 588 aaPredicted RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 ZNF385CQ66K41 422 aaPredicted RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 FBXO42Q6P3S6 717 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 LCTLQ6UWM7 567 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 VN1R4Q7Z5H5 301 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 THOC6Q86W42 341 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 PROSER1Q86XN7 944 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 DTX1Q86Y01 620 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 GPSM1Q86YR5 675 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 IQCKQ8N0W5 287 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 SNIP1Q8TAD8 396 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 UBTD2Q8WUN7 234 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 CRELD1Q96HD1 420 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 TAAR9Q96RI9 348 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 EGFL8Q99944 293 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 PLCD4Q9BRC7 762 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 AICDAQ9GZX7 198 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 CHRNA10Q9GZZ6 450 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 CCDC86Q9H6F5 360 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 MRPS30Q9NP92 439 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 STARD5Q9NSY2 213 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 NUDT4Q9NZJ9 180 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 LNPEPQ9UIQ6 1025 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 ACSL6Q9UKU0 697 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 SLC22A14Q9Y267 594 aa12.55□□□□□ -0.4
CHFR-216ENST00000538235 DSPP15924 2871 aaKnown RBP12.55□□□□□ -0.4
CHFR-216ENST00000538235 A0A0J9YVX5 310 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 SUPT3HB4E1H0 165 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 C4orf51C9J302 202 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 E7EQ34 232 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 H7BY64 318 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 NVLO15381 856 aaKnown RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 LCMT2O60294 686 aaKnown RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 SUPT3HO75486 399 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 KRT37O76014 449 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 MSL3P1P0C860 447 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 VARSP26640 1264 aaKnown RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 GGT5P36269 586 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 BCL6P41182 706 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 GPS2Q13227 327 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 CLN3Q13286 438 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 FRA10AC1Q70Z53 315 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 TRABD2AQ86V40 505 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 KDF1Q8NAX2 398 aaPredicted RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 RHEBL1Q8TAI7 183 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 NAF1Q96HR8 494 aaKnown RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 PRAP1Q96NZ9 151 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 NSUN5Q96P11 429 aaKnown RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 MACROD1Q9BQ69 325 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 NMRAL1Q9HBL8 299 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 PDE7BQ9NP56 450 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 CPSF2Q9P2I0 782 aaKnown RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 TMEM184BQ9Y519 407 aaPredicted RBP12.54□□□□□ -0.4
CHFR-216ENST00000538235 IKBKGQ9Y6K9 419 aa12.54□□□□□ -0.4
CHFR-216ENST00000538235 EPG5Q9HCE0 2579 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 TLDC2A0PJX2 215 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 FEZF1A0PJY2 475 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.53□□□□□ -0.4
CHFR-216ENST00000538235 MAP2K7O14733 419 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 TERTO14746 1132 aaKnown RBP12.53□□□□□ -0.4
CHFR-216ENST00000538235 POLR1CO15160 346 aaPredicted RBP12.53□□□□□ -0.4
CHFR-216ENST00000538235 KDM1AO60341 852 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 CDH16O75309 829 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 STK17BO94768 372 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 KIAA0754O94854 1291 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 WDR47O94967 919 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 TBX6O95947 436 aaPredicted RBP12.53□□□□□ -0.4
CHFR-216ENST00000538235 NTRK1P04629 796 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 ANXA5P08758 320 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 F8A1P23610 371 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 ITPKBP27987 946 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 CMPK1P30085 196 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 RORAP35398 523 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 HSD17B2P37059 387 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 ERVPABLB-1P60509 514 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 SETDB1Q15047 1291 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 ACAP2Q15057 778 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 HKDC1Q2TB90 917 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 FAM69BQ5VUD6 431 aa12.53□□□□□ -0.4
CHFR-216ENST00000538235 TAOK1Q7L7X3 1001 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms