RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CLCA3PQ9Y6N3 262 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 SCRG1O75711 98 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 JUNP05412 331 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 ZNF37AP17032 561 aaPredicted RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 CPN2P22792 545 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 EPHA8P29322 1005 aaPredicted RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 MASP1P48740 699 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 RAB28P51157 221 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ARFIP2P53365 341 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 RPS13P62277 151 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 RPS15P62841 145 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 BST1Q10588 318 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 GTF2H2Q13888 395 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 ITIH4Q14624 930 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 NSDHLQ15738 373 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 VWA2Q5GFL6 755 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PAGE2BQ5JRK9 111 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PERM1Q5SV97 790 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 GTF2H2CQ6P1K8 395 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 DRICH1Q6PGQ1 229 aaPredicted RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 SPATS2Q86XZ4 545 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 PTRH1Q86Y79 214 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 TMEM156Q8N614 296 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 GATSQ8NAP1 163 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 GALNT6Q8NCL4 622 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 PPWD1Q96BP3 646 aaKnown RBP6.99□□□□□ -1.29
MSH6-209ENST00000538136 TCF12Q99081 682 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 CDYLQ9Y232 598 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 CROCCQ5TZA2 2017 aa6.99□□□□□ -1.29
MSH6-209ENST00000538136 DYRK3O43781 588 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 PRKRAO75569 313 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 SASH3O75995 380 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 MATN4O95460 622 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 CKMT2P17540 419 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ITPKBP27987 946 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 RFC3P40938 356 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 RPS9P46781 194 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 PNLIPRP1P54315 467 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 NXPH1P58417 271 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 OR4D1Q15615 310 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 PDK4Q16654 411 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 CYP1B1Q16678 543 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 AGKQ53H12 422 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 TOR1AIP1Q5JTV8 583 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 OR5M10Q6IEU7 315 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 PRICKLE2Q7Z3G6 844 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 EXOC3L1Q86VI1 746 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 C10orf53Q8N6V4 93 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.98□□□□□ -1.29
MSH6-209ENST00000538136 ANKS4BQ8N8V4 417 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 OR5AK3PQ8NH89 298 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 SNIP1Q8TAD8 396 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 MCUR1Q96AQ8 359 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ARSGQ96EG1 525 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ACTR5Q9H9F9 607 aaPredicted RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 FARSBQ9NSD9 589 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 INTS7Q9NVH2 962 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 SLC24A2Q9UI40 661 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ARID1AO14497 2285 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 E7EQ34 232 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 LMO7DNF2Z398 122 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 CES2O00748 559 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 LDB3O75112 727 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 MT-CO3P00414 261 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 SLC1A6P48664 564 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 SHC2P98077 582 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 C2orf80Q0P641 193 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 HKDC1Q2TB90 917 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 TMEM198Q66K66 360 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ZNF549Q6P9A3 640 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 TMEM135Q86UB9 458 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ZNF480Q8WV37 535 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 CRB3Q9BUF7 120 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 GATA5Q9BWX5 397 aaPredicted RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 EML4Q9HC35 981 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 PARD6AQ9NPB6 346 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 TRNAU1APQ9NX07 287 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 DHRS7Q9Y394 339 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 LOXL2Q9Y4K0 774 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 SOBPA7XYQ1 873 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 GSTA4O15217 222 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ZNF189O75820 626 aaPredicted RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 MTHFD1P11586 935 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 COX7A2P14406 83 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 OGNP20774 298 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 ATP5F1P24539 256 aaPredicted RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 CHI3L1P36222 383 aaPredicted RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 MAPK12P53778 367 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 INHBCP55103 352 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 YPEL5P62699 121 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 CLCQ05315 142 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 TBCCQ15814 346 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 DEFB109BQ30KR1 87 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ATP6AP1LQ52LC2 224 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 KIAA1614Q5VZ46 1190 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 AFMIDQ63HM1 303 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 ZCCHC8Q6NZY4 707 aaKnown RBP6.98□□□□□ -1.29
MSH6-209ENST00000538136 ZNF662Q6ZS27 426 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 CHSY3Q70JA7 882 aa6.98□□□□□ -1.29
MSH6-209ENST00000538136 C1orf52Q8N6N3 182 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms