RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 SMPDL3AQ92484 453 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 N4BP2L2Q92802 583 aaPredicted RBP15.69■□□□□ 0.1
ATL3-202ENST00000535789 ABHD17AQ96GS6 310 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 DPH7Q9BTV6 452 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 CUEDC1Q9NWM3 386 aaPredicted RBP15.69■□□□□ 0.1
ATL3-202ENST00000535789 MOCS1Q9NZB8 636 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 SNX7Q9UNH6 387 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 PDE10AQ9Y233 779 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 MAN2B2Q9Y2E5 1009 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 AP1M2Q9Y6Q5 423 aa15.69■□□□□ 0.1
ATL3-202ENST00000535789 CPAMD8Q8IZJ3 1885 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 FITM1A5D6W6 292 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 HBQ1P09105 142 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 FAM153BP0C7A2 387 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 VSX2P58304 361 aaPredicted RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 ZNF460Q14592 562 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 FAM153CQ494X1 144 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 HECTD2Q5U5R9 776 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 ICE2Q659A1 982 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 FBXO42Q6P3S6 717 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 APLFQ8IW19 511 aaPredicted RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 ZBED8Q8IZ13 594 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 METTL27Q8N6F8 245 aaPredicted RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 AENQ8WTP8 325 aaKnown RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.68■□□□□ 0.1
ATL3-202ENST00000535789 ZUFSPQ96AP4 578 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 LINGO1Q96FE5 620 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 C10orf90Q96M02 699 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 FMO2Q99518 471 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 DPH2Q9BQC3 489 aaPredicted RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 SELENOSQ9BQE4 189 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 SLC7A5P2Q9GIP4 190 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 ZNF71Q9NQZ8 489 aaPredicted RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 INTS7Q9NVH2 962 aaKnown RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 STOX2Q9P2F5 926 aaPredicted RBP15.68■□□□□ 0.1
ATL3-202ENST00000535789 SRPK3Q9UPE1 567 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 TP53TG5Q9Y2B4 290 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 SHANK1Q9Y566 2161 aa15.68■□□□□ 0.1
ATL3-202ENST00000535789 ARGFXA6NJG6 315 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 SYF2O95926 243 aaKnown RBP15.67■□□□□ 0.1
ATL3-202ENST00000535789 UMODP07911 640 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 TBPL1P62380 186 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 NKAIN1Q4KMZ8 207 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 COLEC12Q5KU26 742 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 CAPN12Q6ZSI9 719 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 TTLL10Q6ZVT0 673 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 ZNF605Q86T29 641 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 PTRH1Q86Y79 214 aaKnown RBP15.67■□□□□ 0.1
ATL3-202ENST00000535789 ARHGEF39Q8N4T4 335 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 RAB42Q8N4Z0 105 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 GPATCH11Q8N954 259 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 C9orf43Q8TAL5 461 aaPredicted RBP15.67■□□□□ 0.1
ATL3-202ENST00000535789 PLCD4Q9BRC7 762 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 MRPS30Q9NP92 439 aaKnown RBP15.67■□□□□ 0.1
ATL3-202ENST00000535789 PPANQ9NQ55 473 aaKnown RBP15.67■□□□□ 0.1
ATL3-202ENST00000535789 CUTCQ9NTM9 273 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 IRAK4Q9NWZ3 460 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 TAS2R13Q9NYV9 303 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 TLK1Q9UKI8 766 aa15.67■□□□□ 0.1
ATL3-202ENST00000535789 FLNCQ14315 2725 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 A0A1B0GX78 115 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 CCDC151A5D8V7 595 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 CXorf49A8MYA2 514 aaPredicted RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 MASP2O00187 686 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 DSCR3O14972 297 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 P2RX6O15547 441 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 SUV39H1O43463 412 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 RFPL1O75677 317 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 ONECUT2O95948 504 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 H2AFXP16104 143 aaPredicted RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 CMPK1P30085 196 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 SSTR1P30872 391 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 RPA3P35244 121 aaPredicted RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 DCDP81605 110 aaKnown RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 PRDX1Q06830 199 aaKnown RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 MGAT5Q09328 741 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 TSTA3Q13630 321 aaPredicted RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 ATP1A4Q13733 1029 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 ZC3H12BQ5HYM0 836 aaKnown RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 WASHC2DQ5SRD0 308 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 ZC3HC1Q86WB0 502 aaKnown RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 PLD3Q8IV08 490 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 ZFYVE21Q9BQ24 234 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 MESP1Q9BRJ9 268 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 NDC1Q9BTX1 674 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 FAM117AQ9C073 453 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 PHACTR1Q9C0D0 580 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 ABCF3Q9NUQ8 709 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 CTSFQ9UBX1 484 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 MTRF1LQ9UGC7 380 aaKnown RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 NBASA2RRP1 2371 aa15.66■□□□□ 0.1
ATL3-202ENST00000535789 PRRC2CQ9Y520 2896 aaKnown RBP15.66■□□□□ 0.1
ATL3-202ENST00000535789 C9J4A7 227 aa15.65■□□□□ 0.1
ATL3-202ENST00000535789 H0YGG7 62 aa15.65■□□□□ 0.1
ATL3-202ENST00000535789 HAT1O14929 419 aa15.65■□□□□ 0.1
ATL3-202ENST00000535789 ZBTB14O43829 449 aa15.65■□□□□ 0.1
ATL3-202ENST00000535789 SLC28A2O43868 658 aa15.65■□□□□ 0.1
ATL3-202ENST00000535789 WISP3O95389 354 aaPredicted RBP15.65■□□□□ 0.1
ATL3-202ENST00000535789 SFTPCP11686 197 aa15.65■□□□□ 0.1
ATL3-202ENST00000535789 ZNF37AP17032 561 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms