RNA–Protein interactions for RNA: ENST00000535177.1

CYB561A3-205, Transcript of cytochrome b561 family member A3, human

TSL 1 (best)

Gene CYB561A3, Length 1,026 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYB561A3-205	ENST00000535177	THOC6	Q86W42	341 aa	Known RBP	13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	SLC22A9	Q8IVM8	553 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ARMC2	Q8NEN0	867 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	OR2L3	Q8NG85	312 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	OR2A1	Q8NGT9	310 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	PHF21B	Q96EK2	531 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	PPM1M	Q96MI6	270 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	TMEM74	Q96NL1	305 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	DEPDC7	Q96QD5	511 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	OR4K3	Q96R72	315 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	UBL7	Q96S82	380 aa	Predicted RBP	13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	MAP3K3	Q99759	626 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	MIPEP	Q99797	713 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	HAUS8	Q9BT25	410 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	CD244	Q9BZW8	370 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	SEMA6C	Q9H3T2	930 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	C1GALT1	Q9NS00	363 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	PDP2	Q9P2J9	529 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ASB1	Q9Y576	335 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	TNPO3	Q9Y5L0	923 aa	Known RBP	13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	KIF26B	Q2KJY2	2108 aa		13.79	□□□□□ -0.2
CYB561A3-205	ENST00000535177	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177		G3V2L1	256 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177		K7EPI3	171 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ATXN7	O15265	892 aa	Predicted RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	TOX3	O15405	576 aa	Predicted RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	KIF1C	O43896	1103 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	DLX3	O60479	287 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	CCNT2	O60583	730 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	STK16	O75716	305 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ZWINT	O95229	277 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ANKRD34C	P0C6C1	535 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	EEF1D	P29692	281 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	CMPK1	P30085	196 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	CCKBR	P32239	447 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	LSS	P48449	732 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	TLE3	Q04726	772 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ZFP36L1	Q07352	338 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	NAA25	Q14CX7	972 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	PCBP2	Q15366	365 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	CACHD1	Q5VU97	1274 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	METTL2B	Q6P1Q9	378 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	C17orf64	Q86WR6	236 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	FAM20C	Q8IXL6	584 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ESAM	Q96AP7	390 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	CCDC126	Q96EE4	140 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	ZNF768	Q9H5H4	540 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	MRPS30	Q9NP92	439 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	KCNK9	Q9NPC2	374 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	DNAJC11	Q9NVH1	559 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	INTS7	Q9NVH2	962 aa	Known RBP	13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	SEMA5B	Q9P283	1151 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	COPG2	Q9UBF2	871 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	OPTC	Q9UBM4	332 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	SLC22A14	Q9Y267	594 aa		13.78	□□□□□ -0.2
CYB561A3-205	ENST00000535177	IGHV5-51	A0A0C4DH38	117 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	TMEM120B	A0PK00	339 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	RRP8	O43159	456 aa	Known RBP	13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	CS	O75390	466 aa	Known RBP	13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SIX3	O95343	332 aa	Predicted RBP	13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	RPS17	P08708	135 aa	Known RBP	13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	CPA3	P15088	417 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	PVR	P15151	417 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	ST6GAL1	P15907	406 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	MAG	P20916	626 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	PRKAA2	P54646	552 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	HERVK_113	P63132	956 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	ABAT	P80404	500 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	PRDX1	Q06830	199 aa	Known RBP	13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	CDC16	Q13042	620 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	PCLAF	Q15004	111 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	PDK4	Q16654	411 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	KIAA1614	Q5VZ46	1190 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	LRRC69	Q6ZNQ3	347 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	KMT5C	Q86Y97	462 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SPACA3	Q8IXA5	215 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	C19orf47	Q8N9M1	422 aa	Known RBP	13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SNX31	Q8N9S9	440 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	RCBTB1	Q8NDN9	531 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SLC39A7	Q92504	469 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	TMEM237	Q96Q45	408 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SELENOS	Q9BQE4	189 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	ERVK-6	Q9BXR3	956 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SLC6A20	Q9NP91	592 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SOHLH2	Q9NX45	425 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	ANKMY1	Q9P2S6	941 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SH2B3	Q9UQQ2	575 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	DYRK1B	Q9Y463	629 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	KCNE2	Q9Y6J6	123 aa		13.77	□□□□□ -0.21
CYB561A3-205	ENST00000535177	CFAP46	Q8IYW2	2715 aa		13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	HELZ2	Q9BYK8	2649 aa	Known RBP	13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	IGKV1-8	A0A0C4DH67	115 aa		13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	LRRC14B	A6NHZ5	514 aa		13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	SLC9B1P1	A6NJY1	282 aa		13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177		A8MU76	341 aa		13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	E2F3	O00716	465 aa		13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	HGS	O14964	777 aa	Predicted RBP	13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	ZBTB11	O95625	1053 aa	Predicted RBP	13.76	□□□□□ -0.21
CYB561A3-205	ENST00000535177	CDH1	P12830	882 aa		13.76	□□□□□ -0.21

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