RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 HES6Q96HZ4 224 aa13.21□□□□□ -0.29
CCDC84-208ENST00000534656 ACAT2Q9BWD1 397 aa13.21□□□□□ -0.29
CCDC84-208ENST00000534656 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-208ENST00000534656 C14orf105Q9NVL8 296 aa13.21□□□□□ -0.29
CCDC84-208ENST00000534656 TRPC4Q9UBN4 977 aa13.21□□□□□ -0.29
CCDC84-208ENST00000534656 ZNF148Q9UQR1 794 aa13.21□□□□□ -0.29
CCDC84-208ENST00000534656 MRPS2Q9Y399 296 aaKnown RBP13.21□□□□□ -0.29
CCDC84-208ENST00000534656 KLF2Q9Y5W3 355 aaPredicted RBP13.21□□□□□ -0.29
CCDC84-208ENST00000534656 ABCA12Q86UK0 2595 aa13.21□□□□□ -0.3
CCDC84-208ENST00000534656 PHF2O75151 1096 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 VPS26AO75436 327 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 MATN4O95460 622 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 HEXBP07686 556 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 APRTP07741 180 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 ERGP11308 486 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 ETS1P14921 441 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 GRNP28799 593 aaKnown RBP13.2□□□□□ -0.3
CCDC84-208ENST00000534656 SLC26A3P40879 764 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 EEF1A2Q05639 463 aaKnown RBP13.2□□□□□ -0.3
CCDC84-208ENST00000534656 FAAH2Q6GMR7 532 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 TMEM207Q6UWW9 146 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 PRUNE1Q86TP1 453 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 DNAJB8Q8NHS0 232 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 PLCD4Q9BRC7 762 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 YIPF2Q9BWQ6 316 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 TGIF2Q9GZN2 237 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCDC84-208ENST00000534656 MRPS30Q9NP92 439 aaKnown RBP13.2□□□□□ -0.3
CCDC84-208ENST00000534656 MKKSQ9NPJ1 570 aaPredicted RBP13.2□□□□□ -0.3
CCDC84-208ENST00000534656 TREX1Q9NSU2 369 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 RIC8BQ9NVN3 520 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 PAK5Q9P286 719 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 ABI3Q9P2A4 366 aa13.2□□□□□ -0.3
CCDC84-208ENST00000534656 SUCOQ9UBS9 1254 aaKnown RBP13.2□□□□□ -0.3
CCDC84-208ENST00000534656 RUVBL1Q9Y265 456 aaKnown RBP13.2□□□□□ -0.3
CCDC84-208ENST00000534656 LOC102723996A0A087X1L8 192 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 TRGV8A0A0C4DH27 118 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 FFAR3O14843 346 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 GPR42O15529 346 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 RASAL1O95294 804 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 WDPCPO95876 746 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 F10P00742 488 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 CRYABP02511 175 aaKnown RBP13.19□□□□□ -0.3
CCDC84-208ENST00000534656 UQCRHP07919 91 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 CELA2AP08217 269 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 ITGAMP11215 1152 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 ICAM2P13598 275 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 EIF3BP55884 814 aaKnown RBP13.19□□□□□ -0.3
CCDC84-208ENST00000534656 SESN2P58004 480 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-208ENST00000534656 AP2B1P63010 937 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 CRADDP78560 199 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 KIF5AQ12840 1032 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 GBX1Q14549 363 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 PCOLCEQ15113 449 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 HKDC1Q2TB90 917 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 CTSL3PQ5NE16 218 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 GARNL3Q5VVW2 1013 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 SUSD1Q6UWL2 747 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 PAQR7Q86WK9 346 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 CSNK1A1LQ8N752 337 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 AMER3Q8N944 861 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 OR9A1PQ8NGU1 263 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 C1orf54Q8WWF1 131 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 SMPDL3AQ92484 453 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 MMABQ96EY8 250 aaPredicted RBP13.19□□□□□ -0.3
CCDC84-208ENST00000534656 CCDC120Q96HB5 630 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 BIRC8Q96P09 236 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 RNF32Q9H0A6 362 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF700Q9H0M5 742 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 SYNPO2LQ9H987 977 aa13.19□□□□□ -0.3
CCDC84-208ENST00000534656 IGKV1-8A0A0C4DH67 115 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 A0A0U1RQJ8 604 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 CCL21O00585 134 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 FOXS1O43638 330 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 UNC5CO95185 931 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ANXA5P08758 320 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 MST1P26927 711 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 NMBRP28336 390 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ATP5DP30049 168 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 FMO4P31512 558 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 RPA3P35244 121 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-208ENST00000534656 NPY2RP49146 381 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF75DP51815 510 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 SNX1Q13596 522 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ARHGAP19Q14CB8 494 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ANKRD20A4Q4UJ75 823 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 SEL1L2Q5TEA6 688 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 HIBCHQ6NVY1 386 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-208ENST00000534656 MTFR2Q6P444 385 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 LRRC8BQ6P9F7 803 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 TMEM205Q6UW68 189 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 BNC2Q6ZN30 1099 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-208ENST00000534656 MRGPRGQ86SM5 289 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ARHGEF39Q8N4T4 335 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 ZNF808Q8N4W9 903 aaPredicted RBP13.18□□□□□ -0.3
CCDC84-208ENST00000534656 CCDC89Q8N998 374 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 SUN3Q8TAQ9 357 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
CCDC84-208ENST00000534656 IL22Q9GZX6 179 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms