RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 GPR78Q96P69 363 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 TEFMQ96QE5 360 aaKnown RBP13.45□□□□□ -0.26
VPS11-205ENST00000534551 ATOH8Q96SQ7 321 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 PLCD4Q9BRC7 762 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 ASPSCR1Q9BZE9 553 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 SPNS1Q9H2V7 528 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 AKIRIN1Q9H9L7 192 aaPredicted RBP13.45□□□□□ -0.26
VPS11-205ENST00000534551 FANCEQ9HB96 536 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 INTS7Q9NVH2 962 aaKnown RBP13.45□□□□□ -0.26
VPS11-205ENST00000534551 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 EURLQ9NYK6 297 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 WWOXQ9NZC7 414 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 PSMC3IPQ9P2W1 217 aaPredicted RBP13.45□□□□□ -0.26
VPS11-205ENST00000534551 RNF112Q9ULX5 631 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 ACOT9Q9Y305 439 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 TMEM184BQ9Y519 407 aaPredicted RBP13.45□□□□□ -0.26
VPS11-205ENST00000534551 EPG5Q9HCE0 2579 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 SEC16AO15027 2179 aa13.45□□□□□ -0.26
VPS11-205ENST00000534551 LOC105369274A0A096LPK9 316 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 LOC102723532A0A0G2JNH3 316 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.44□□□□□ -0.26
VPS11-205ENST00000534551 H7BY64 318 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 GOLGA8RI6L899 631 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 P2RX6O15547 441 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 KERAO60938 352 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 RFPL1O75677 317 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 OR2B3O76000 313 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 KRT38O76015 456 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 WDR47O94967 919 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 MED26O95402 600 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 ANXA5P08758 320 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 HSPA7P48741 367 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 AGTR2P50052 363 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 ITGA1P56199 1179 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 SNRPNP63162 240 aaKnown RBP13.44□□□□□ -0.26
VPS11-205ENST00000534551 TLE3Q04726 772 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 PRDX1Q06830 199 aaKnown RBP13.44□□□□□ -0.26
VPS11-205ENST00000534551 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS11-205ENST00000534551 TECRLQ5HYJ1 363 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 LCN10Q6JVE6 187 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 MCATQ8IVS2 390 aaKnown RBP13.44□□□□□ -0.26
VPS11-205ENST00000534551 OR4N4Q8N0Y3 316 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 CYP4X1Q8N118 509 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 PDPRQ8NCN5 879 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 HNRNPLLQ8WVV9 542 aaKnown RBP13.44□□□□□ -0.26
VPS11-205ENST00000534551 ANKRD7Q92527 254 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 N4BP2L2Q92802 583 aaPredicted RBP13.44□□□□□ -0.26
VPS11-205ENST00000534551 CAVIN3Q969G5 261 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 NKD1Q969G9 470 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 PRAP1Q96NZ9 151 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 SELENOSQ9BQE4 189 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 TRIM54Q9BYV2 358 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 CPNE5Q9HCH3 593 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 CD274Q9NZQ7 290 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 RAB21Q9UL25 225 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 SLC22A14Q9Y267 594 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 MGAQ8IWI9 3026 aa13.44□□□□□ -0.26
VPS11-205ENST00000534551 A0A087WV48 116 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 LOC101059948A0A1B0GTJ6 334 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 FEZF1A0PJY2 475 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 LRRC14BA6NHZ5 514 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 E7EQ34 232 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 TK2O00142 265 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 ZSCAN9O15535 394 aaPredicted RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 ZNF749O43361 778 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 KLHL2O95198 593 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 CCNDBP1O95273 360 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 SNRPAP09012 282 aaKnown RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 MSL3P1P0C860 447 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 LIFP15018 202 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 CD82P27701 267 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 SLC6A12P48065 614 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 FOXL2P58012 376 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 VSX2P58304 361 aaPredicted RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 CDKL1Q00532 357 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 CATSPEREQ5SY80 951 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 FAM69BQ5VUD6 431 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 CAPN13Q6MZZ7 669 aaPredicted RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 LCTLQ6UWM7 567 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 TMPRSS11BQ86T26 416 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 THOC6Q86W42 341 aaKnown RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 CACNA2D3Q8IZS8 1091 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 NLGN4XQ8N0W4 816 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 METTL27Q8N6F8 245 aaPredicted RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 NLGN4YQ8NFZ3 816 aaPredicted RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 NEIL2Q969S2 332 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 CHRNA10Q9GZZ6 450 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 NMRAL1Q9HBL8 299 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 XPR1Q9UBH6 696 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 DHCR7Q9UBM7 475 aaKnown RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 TLK1Q9UKI8 766 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 PLCL2Q9UPR0 1127 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 KLK4Q9Y5K2 254 aa13.43□□□□□ -0.26
VPS11-205ENST00000534551 MRPS18BQ9Y676 258 aaKnown RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 KMT2BQ9UMN6 2715 aaPredicted RBP13.43□□□□□ -0.26
VPS11-205ENST00000534551 SCN2AQ99250 2005 aa13.42□□□□□ -0.26
VPS11-205ENST00000534551 PCSK5Q92824 1860 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms