RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 GABRA4P48169 554 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 ZC3H12BQ5HYM0 836 aaKnown RBP23.22■■□□□ 1.31
SIPA1-210ENST00000534406 ZNF425Q6IV72 752 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 ADCK2Q7Z695 626 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 LCA5Q86VQ0 697 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 KLHDC8AQ8IYD2 350 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 DNAJC22Q8N4W6 341 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 FCRL4Q96PJ5 515 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 TMEM79Q9BSE2 394 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 CUEDC1Q9NWM3 386 aaPredicted RBP23.22■■□□□ 1.31
SIPA1-210ENST00000534406 XPR1Q9UBH6 696 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 SNX7Q9UNH6 387 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 PLCL2Q9UPR0 1127 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 SH2B3Q9UQQ2 575 aa23.22■■□□□ 1.31
SIPA1-210ENST00000534406 GOLGA8RI6L899 631 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 TLX3O43711 291 aaPredicted RBP23.21■■□□□ 1.31
SIPA1-210ENST00000534406 WDR47O94967 919 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 RBP1P09455 135 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 PYGBP11216 843 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 NPPBP16860 134 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 ITGA1P56199 1179 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 C18orf21Q32NC0 220 aaPredicted RBP23.21■■□□□ 1.31
SIPA1-210ENST00000534406 RNF44Q7L0R7 432 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 THOC6Q86W42 341 aaKnown RBP23.21■■□□□ 1.31
SIPA1-210ENST00000534406 PAQR7Q86WK9 346 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 CYP4X1Q8N118 509 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 OR1L3Q8NH93 324 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 OR4K3Q96R72 315 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 ULBP3Q9BZM4 244 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 LGALS13Q9UHV8 139 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 PTBP2Q9UKA9 531 aaKnown RBP23.21■■□□□ 1.31
SIPA1-210ENST00000534406 DYRK1BQ9Y463 629 aa23.21■■□□□ 1.31
SIPA1-210ENST00000534406 STMND1H3BQB6 276 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 NRP2O60462 931 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 CTSVO60911 334 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 STK17BO94768 372 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 CDH1P12830 882 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 EZRP15311 586 aaKnown RBP23.2■■□□□ 1.3
SIPA1-210ENST00000534406 GGT5P36269 586 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 PWWP2BQ6NUJ5 590 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 TMEM126BQ8IUX1 230 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 MCATQ8IVS2 390 aaKnown RBP23.2■■□□□ 1.3
SIPA1-210ENST00000534406 GPR135Q8IZ08 494 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 KDF1Q8NAX2 398 aaPredicted RBP23.2■■□□□ 1.3
SIPA1-210ENST00000534406 UBTD2Q8WUN7 234 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 ZFYVE21Q9BQ24 234 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 TMEM109Q9BVC6 243 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 MRPL46Q9H2W6 279 aaKnown RBP23.2■■□□□ 1.3
SIPA1-210ENST00000534406 IRAK4Q9NWZ3 460 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 SERTAD3Q9UJW9 196 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 SLC22A14Q9Y267 594 aa23.2■■□□□ 1.3
SIPA1-210ENST00000534406 MAP1BP46821 2468 aaKnown RBP23.19■■□□□ 1.3
SIPA1-210ENST00000534406 A0A1W2PPM1 405 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 IQCJ-SCHIP1C9J366 451 aaPredicted RBP23.19■■□□□ 1.3
SIPA1-210ENST00000534406 E7EQ34 232 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 H7BY64 318 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 TAPBPO15533 448 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 CTIFO43310 598 aaKnown RBP23.19■■□□□ 1.3
SIPA1-210ENST00000534406 HCRTR1O43613 425 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 TIAF1O95411 115 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 MTHFD2P13995 350 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 GFAPP14136 432 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 HSPA7P48741 367 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 LRRC70Q7Z2Q7 622 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 ZFAND4Q86XD8 727 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 PROSER1Q86XN7 944 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 ZNF248Q8NDW4 579 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 SLC5A11Q8WWX8 675 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 PRAP1Q96NZ9 151 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 MRPL57Q9BQC6 102 aaKnown RBP23.19■■□□□ 1.3
SIPA1-210ENST00000534406 SELENOSQ9BQE4 189 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 TMEM184CQ9NVA4 438 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 CPSF2Q9P2I0 782 aaKnown RBP23.19■■□□□ 1.3
SIPA1-210ENST00000534406 TMEM184BQ9Y519 407 aaPredicted RBP23.19■■□□□ 1.3
SIPA1-210ENST00000534406 KCNE2Q9Y6J6 123 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 DMXL2Q8TDJ6 3036 aa23.19■■□□□ 1.3
SIPA1-210ENST00000534406 MDC1Q14676 2089 aaKnown RBP23.18■■□□□ 1.3
SIPA1-210ENST00000534406 A0A0J9YVX5 310 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 TK2O00142 265 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 HAT1O14929 419 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 SCRG1O75711 98 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 STK16O75716 305 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 OR2B3O76000 313 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 KIAA0754O94854 1291 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 GSTA1P08263 222 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 ZNF28P17035 718 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 GDF5P43026 501 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 CDC16Q13042 620 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 FBXO48Q5FWF7 155 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 NEIL2Q969S2 332 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 DNAJC11Q9NVH1 559 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 PILRAQ9UKJ1 303 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 TMCO1Q9UM00 188 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 PCDHB3Q9Y5E6 796 aa23.18■■□□□ 1.3
SIPA1-210ENST00000534406 ANKRD11Q6UB99 2663 aaPredicted RBP23.18■■□□□ 1.3
SIPA1-210ENST00000534406 FOXO6A8MYZ6 492 aa23.17■■□□□ 1.3
SIPA1-210ENST00000534406 CCNT2O60583 730 aaKnown RBP23.17■■□□□ 1.3
SIPA1-210ENST00000534406 CPNE3O75131 537 aaKnown RBP23.17■■□□□ 1.3
SIPA1-210ENST00000534406 GLRA3O75311 464 aa23.17■■□□□ 1.3
SIPA1-210ENST00000534406 DLGAP3O95886 979 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms