RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 C1QAP02745 245 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 PPARGP37231 505 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SKIV2L2P42285 1042 aaKnown RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SARNPP82979 210 aaKnown RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 FOXK1P85037 733 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 DR1Q01658 176 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 KCNC4Q03721 635 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 PRTGQ2VWP7 1150 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 PLEKHN1Q494U1 663 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 RNF187Q5TA31 235 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 FAM219BQ5XKK7 198 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 ICE2Q659A1 982 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 STEAP4Q687X5 459 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 FAAH2Q6GMR7 532 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 KIRREL2Q6UWL6 708 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 UBE2R2Q712K3 238 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 RNF44Q7L0R7 432 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 OVCH1Q7RTY7 1134 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 CEP97Q8IW35 865 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SPATA6LQ8N4H0 392 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 AMER3Q8N944 861 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 ZNF740Q8NDX6 193 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 ANKRD49Q8WVL7 239 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 LINGO1Q96FE5 620 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 CERS2Q96G23 380 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 OR2A5Q96R48 311 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 OR4K3Q96R72 315 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 NAPGQ99747 312 aaPredicted RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 PLCD4Q9BRC7 762 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 NDC1Q9BTX1 674 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SLC25A23Q9BV35 468 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 TSSK1BQ9BXA7 367 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SYTL2Q9HCH5 934 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 ACSS2Q9NR19 701 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 GRHL1Q9NZI5 618 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 RUVBL1Q9Y265 456 aaKnown RBP9.19□□□□□ -0.94
SSBP3-215ENST00000533946 NTNG1Q9Y2I2 539 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 KLK4Q9Y5K2 254 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 HS3ST3B1Q9Y662 390 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 SAR1BQ9Y6B6 198 aa9.19□□□□□ -0.94
SSBP3-215ENST00000533946 A0A0A6YYC8 382 aaPredicted RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 FITM1A5D6W6 292 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 MKRN2OSH3BPM6 223 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 I3L1I5 382 aaPredicted RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 AP3B1O00203 1094 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 CDC7O00311 574 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 DSCR3O14972 297 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 MAST4O15021 2626 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 FAM155BO75949 473 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 WISP2O76076 250 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 RECKO95980 971 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 MPC1LP0DKB6 136 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 TCP1P17987 556 aaKnown RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 PAMP19021 973 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 SAT1P21673 171 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 ATP5DP30049 168 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 SSTR1P30872 391 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 RPA3P35244 121 aaPredicted RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 CENPEQ02224 2701 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 PRDX1Q06830 199 aaKnown RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 PDIA2Q13087 525 aaKnown RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 SPTAN1Q13813 2472 aaKnown RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 FBXO48Q5FWF7 155 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 SPANXN3Q5MJ09 141 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 DCAF10Q5QP82 559 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 HECTD2Q5U5R9 776 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 TLDC1Q6P9B6 456 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 PDSS2Q86YH6 399 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 CNTN4Q8IWV2 1026 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 PARP9Q8IXQ6 854 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 GPATCH11Q8N954 259 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 FBXO36Q8NEA4 188 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 OR2Y1Q8NGV0 311 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 GSDMBQ8TAX9 411 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 GRK7Q8WTQ7 553 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 SMPDL3AQ92484 453 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 KCNJ9Q92806 393 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 MIB2Q96AX9 1013 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 NAP1L3Q99457 506 aaPredicted RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 MCMBPQ9BTE3 642 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 AICDAQ9GZX7 198 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 CLMPQ9H6B4 373 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 ZNF552Q9H707 407 aaPredicted RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 CAB39LQ9H9S4 337 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 CELSR2Q9HCU4 2923 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 MRPS30Q9NP92 439 aaKnown RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 TXLNGQ9NUQ3 528 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 INTS7Q9NVH2 962 aaKnown RBP9.18□□□□□ -0.94
SSBP3-215ENST00000533946 SPATA7Q9P0W8 599 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 FBXL4Q9UKA2 621 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 AP1M2Q9Y6Q5 423 aa9.18□□□□□ -0.94
SSBP3-215ENST00000533946 HIVEP3Q5T1R4 2406 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 IGHV3-20A0A0C4DH32 117 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 GOLGA6L10A0A0M3HER8 536 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 A0A1B0GX78 115 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 VSTM2BA6NLU5 285 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 EFCAB8A8MWE9 144 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 TARM1B6A8C7 271 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 C4orf51C9J302 202 aa9.17□□□□□ -0.94
SSBP3-215ENST00000533946 C9J4A7 227 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms