RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 ANKHD1Q8IWZ3 2542 aaKnown RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 IGLV3-12A0A075B6K2 115 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 A0A1B0GTL3 188 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 CCDC162PA2VCL2 907 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 FAM90A27PA6NNH2 459 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 IQCF5A8MTL0 148 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TARM1B6A8C7 271 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 F8W8V4 182 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 H0YGG7 62 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 APOC4-APOC2K7ER74 178 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TSPAN12O95859 305 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 APOC2P02655 101 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 DRD2P14416 443 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 EEF1DP29692 281 aaKnown RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 CCR7P32248 378 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 FOXN2P32314 431 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 EIF3EP60228 445 aaKnown RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 ARF3P61204 181 aaPredicted RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 MAT1AQ00266 395 aaKnown RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 OC90Q02509 493 aaPredicted RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 TSTA3Q13630 321 aaPredicted RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 DSG2Q14126 1118 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 FASTKQ14296 549 aaKnown RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 GRB7Q14451 532 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TMED2Q15363 201 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 CCDC38Q502W7 563 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 KRTCAP3Q53RY4 240 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 UNC5DQ6UXZ4 953 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 PACS1Q6VY07 963 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 Q6ZPB1 254 aaPredicted RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 BBS12Q6ZW61 710 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 RNF44Q7L0R7 432 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 RCOR2Q8IZ40 523 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 GHDCQ8N2G8 530 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TAB3Q8N5C8 712 aaPredicted RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 DNAAF3Q8N9W5 541 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.77□□□□□ -1.01
PACS1-214ENST00000533811 GSDMBQ8TAX9 411 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 ACTL9Q8TC94 416 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 THAP3Q8WTV1 239 aaPredicted RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 ASZ1Q8WWH4 475 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 METTL21AQ8WXB1 218 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 NRGNQ92686 78 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 ZNF354BQ96LW1 612 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 SPATA13Q96N96 652 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TTC1Q99614 292 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 ZFYVE21Q9BQ24 234 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 C19orf43Q9BQ61 176 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TMEM121Q9BTD3 319 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TUBB6Q9BUF5 446 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 TSSK1BQ9BXA7 367 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 KCNK13Q9HB14 408 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 MKKSQ9NPJ1 570 aaPredicted RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 ZNHIT6Q9NWK9 470 aaKnown RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 MKL2Q9ULH7 1088 aa8.77□□□□□ -1.01
PACS1-214ENST00000533811 RUVBL1Q9Y265 456 aaKnown RBP8.77□□□□□ -1.01
PACS1-214ENST00000533811 A0A0A6YYC8 382 aaPredicted RBP8.76□□□□□ -1.01
PACS1-214ENST00000533811 A0A1W2PQ72 361 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 E9PLN8 166 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 I3L1I5 382 aaPredicted RBP8.76□□□□□ -1.01
PACS1-214ENST00000533811 PRRG2O14669 202 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 ASNA1O43681 348 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 VPS26AO75436 327 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 FKBP9O95302 570 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 APOA4P06727 396 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 C8orf89P0DMQ9 161 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 RBP3P10745 1247 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 CD46P15529 392 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 TUBA3CQ13748 450 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 OR1C1Q15619 314 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 ASTE1Q2TB18 679 aaPredicted RBP8.76□□□□□ -1.01
PACS1-214ENST00000533811 HKDC1Q2TB90 917 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 MINDY4Q4G0A6 757 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 ACER2Q5QJU3 275 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 SPINK14Q6IE38 97 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 TUBA3EQ6PEY2 450 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 LANCL3Q6ZV70 420 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 GALNTL5Q7Z4T8 443 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.76□□□□□ -1.01
PACS1-214ENST00000533811 DOLPP1Q86YN1 238 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 KATNAL2Q8IYT4 538 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 EID3Q8N140 333 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 KRT222Q8N1A0 295 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 CSNK1A1LQ8N752 337 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 AMER3Q8N944 861 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 TMEM178AQ8NBL3 297 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 FAM98AQ8NCA5 519 aaKnown RBP8.76□□□□□ -1.01
PACS1-214ENST00000533811 OR2L3Q8NG85 312 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 RAD51AP1Q96B01 352 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 PDLIM2Q96JY6 352 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 FRMD6Q96NE9 622 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 PPP1R2P1Q96PQ5 205 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 VKORC1Q9BQB6 163 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 ZNF559Q9BR84 538 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 UTP23Q9BRU9 249 aaKnown RBP8.76□□□□□ -1.01
PACS1-214ENST00000533811 DPH7Q9BTV6 452 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 TMUB1Q9BVT8 246 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 ARNT2Q9HBZ2 717 aa8.76□□□□□ -1.01
PACS1-214ENST00000533811 TTC7AQ9ULT0 858 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms