RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 SLC35F5Q8WV83 523 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 KCTD4Q8WVF5 259 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 KHSRPQ92945 711 aaKnown RBP eCLIP5.29□□□□□ -1.568e-8■■■□□ 15
CKAP5-212ENST00000533413 ZNF486Q96H40 463 aaPredicted RBP5.29□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF512Q96ME7 567 aaPredicted RBP5.29□□□□□ -1.56
CKAP5-212ENST00000533413 ADAM2Q99965 735 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 KCNH6Q9H252 994 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 PRDM13Q9H4Q3 707 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 PDZD7Q9H5P4 517 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 RUBCNLQ9H714 662 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 SPAG4Q9NPE6 437 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 CNGB3Q9NQW8 809 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 ZSCAN32Q9NX65 697 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 TOR4AQ9NXH8 423 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 CFAP97Q9P2B7 532 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 PCDHB5Q9Y5E4 795 aa5.29□□□□□ -1.56
CKAP5-212ENST00000533413 HEMK1Q9Y5R4 338 aaPredicted RBP5.29□□□□□ -1.56
CKAP5-212ENST00000533413 TET1Q8NFU7 2136 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SAC3D1A6NKF1 404 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SNTNA6NMZ2 147 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 PSMD12O00232 456 aaPredicted RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 EEF2KO00418 725 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 GPR171O14626 319 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 MRASO14807 208 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 DCLK1O15075 740 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 POLR1CO15160 346 aaPredicted RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 LDLRAD4O15165 306 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 UBDO15205 165 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 MSI1O43347 362 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 AKR7A2O43488 359 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 TGM5O43548 720 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 RBBP9O75884 186 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 AP2A1O95782 977 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 PDGFBP01127 241 aaPredicted RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 LIPFP07098 398 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SNRPB2P08579 225 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 TIMP2P16035 220 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 IFNA8P32881 189 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 CCR4P51679 360 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 NDST2P52849 883 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 STX1BP61266 288 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 UBE2IP63279 158 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 DEFB103AP81534 67 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 UBE3AQ05086 875 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 NPRL3Q12980 569 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 INPP5AQ14642 412 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 POU4F3Q15319 338 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 CERCAMQ5T4B2 595 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 STRADAQ7RTN6 431 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 TMEM135Q86UB9 458 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 RTN4RL1Q86UN2 441 aaPredicted RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 CAMK1DQ8IU85 385 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 KRT78Q8N1N4 520 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 FIBCD1Q8N539 461 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 KDF1Q8NAX2 398 aaPredicted RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SLC2A14Q8TDB8 520 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 LIPHQ8WWY8 451 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 LINC01599Q8WXQ3 324 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 RAB24Q969Q5 203 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 TAMM41Q96BW9 452 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 ISOC1Q96CN7 298 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 RNF125Q96EQ8 232 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SF3B5Q9BWJ5 86 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 NKX2-4Q9H2Z4 354 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 TTYH1Q9H313 450 aaPredicted RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 RMND5AQ9H871 391 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 LRRC4Q9HBW1 653 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 EML4Q9HC35 981 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 CCDC167Q9P0B6 97 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 REV1Q9UBZ9 1251 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 BACE2Q9Y5Z0 518 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 BRCA2P51587 3418 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 ILVBLA1L0T0 632 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF839A8K0R7 811 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 ERI2A8K979 691 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 ZNF879B4DU55 563 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 NUAK1O60285 661 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 XYLBO75191 536 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SPDEFO95238 335 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 CCNDBP1O95273 360 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 TPH1P17752 444 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SERPINF1P36955 418 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 BMXP51813 675 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 BCAT1P54687 386 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 GNG2P59768 71 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 BST2Q10589 180 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 OLIG2Q13516 323 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 CEBPEQ15744 281 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 OGFOD2Q6N063 350 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.28□□□□□ -1.561e-6■■■■□ 21.3
CKAP5-212ENST00000533413 LYSMD3Q7Z3D4 306 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 PIWIL4Q7Z3Z4 852 aaKnown RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 LIMS2Q7Z4I7 341 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 METTL23Q86XA0 190 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 DENND1CQ8IV53 801 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 SIX6OS1Q8N1H7 587 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 FSTL5Q8N475 847 aaPredicted RBP5.28□□□□□ -1.56
CKAP5-212ENST00000533413 PDZD8Q8NEN9 1154 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
CKAP5-212ENST00000533413 OR8J1Q8NGP2 316 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms