RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 DCDP81605 110 aaKnown RBP9.42□□□□□ -0.9
NUP98-220ENST00000533346 SSPNQ14714 243 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 NCF4Q15080 339 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 ZKSCAN8Q15776 578 aaPredicted RBP9.42□□□□□ -0.9
NUP98-220ENST00000533346 PHKG1Q16816 387 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 PPP1R3AQ16821 1122 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 ZXDCQ2QGD7 858 aaPredicted RBP9.42□□□□□ -0.9
NUP98-220ENST00000533346 PRTGQ2VWP7 1150 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 TAF1BQ53T94 588 aaPredicted RBP9.42□□□□□ -0.9
NUP98-220ENST00000533346 GARNL3Q5VVW2 1013 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 LCN10Q6JVE6 187 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 AGTRAPQ6RW13 159 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 SUSD1Q6UWL2 747 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 SBSNQ6UWP8 590 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 CCDC91Q7Z6B0 441 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 CTAGE6Q86UF2 777 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 CTAGE4Q8IX94 777 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 FAM20CQ8IXL6 584 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 C2orf73Q8N5S3 287 aaPredicted RBP9.42□□□□□ -0.9
NUP98-220ENST00000533346 CEP112Q8N8E3 955 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 GPATCH11Q8N954 259 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 OR4K1Q8NGD4 311 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 APOBEC4Q8WW27 367 aaKnown RBP9.42□□□□□ -0.9
NUP98-220ENST00000533346 ATL1Q8WXF7 558 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 EXTL1Q92935 676 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 FKBP10Q96AY3 582 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 FBXL8Q96CD0 374 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 LINGO1Q96FE5 620 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 UBXN10Q96LJ8 280 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 IP6K3Q96PC2 410 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 MIPEPQ99797 713 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 DPH7Q9BTV6 452 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 NDC1Q9BTX1 674 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 TRIM54Q9BYV2 358 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 DERL2Q9GZP9 239 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 ACTL8Q9H568 366 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 WDR54Q9H977 334 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 CCDC177Q9NQR7 707 aaPredicted RBP9.42□□□□□ -0.9
NUP98-220ENST00000533346 STARD5Q9NSY2 213 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 SLC17A6Q9P2U8 582 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 CIDEBQ9UHD4 219 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 TAC3Q9UHF0 121 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 POLHQ9Y253 713 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 KCNMB2Q9Y691 235 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 ATMQ13315 3056 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 COL6A6A6NMZ7 2263 aa9.42□□□□□ -0.9
NUP98-220ENST00000533346 IGLV3-12A0A075B6K2 115 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 A0A1B0GX78 115 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 KRT87PA6NCN2 255 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 CXorf49A8MYA2 514 aaPredicted RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 CTSBP07858 339 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 FURINP09958 794 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 NPPBP16860 134 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 ECHS1P30084 290 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 STX2P32856 288 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 SPRP35270 261 aaPredicted RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 HNMTP50135 292 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 TBPL1P62380 186 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 YBX1P67809 324 aaKnown RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 CYP4F2P78329 520 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 SLC7A5Q01650 507 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 FAM53BQ14153 422 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 DEFB110Q30KQ9 67 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 WASHC2DQ5SRD0 308 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 PRMT9Q6P2P2 845 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 OVCH1Q7RTY7 1134 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 TAX1BP1Q86VP1 789 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 CEP97Q8IW35 865 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 ZNF655Q8N720 491 aaPredicted RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 ENDOVQ8N8Q3 282 aaKnown RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 TTC29Q8NA56 475 aaPredicted RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 ABHD11Q8NFV4 315 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 TRIM44Q96DX7 344 aaPredicted RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 TM4SF19Q96DZ7 209 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 TSPAN17Q96FV3 270 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 RUFY1Q96T51 708 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 SELENOSQ9BQE4 189 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 HAUS8Q9BT25 410 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 SLC7A5P2Q9GIP4 190 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 MLXIPLQ9NP71 852 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 SLC22A11Q9NSA0 550 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 CUTCQ9NTM9 273 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 TXLNGQ9NUQ3 528 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 DMGDHQ9UI17 866 aaKnown RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 PADI2Q9Y2J8 665 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 KLHL20Q9Y2M5 609 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 OARD1Q9Y530 152 aa9.41□□□□□ -0.9
NUP98-220ENST00000533346 MRPS18BQ9Y676 258 aaKnown RBP9.41□□□□□ -0.9
NUP98-220ENST00000533346 LOC105369274A0A096LPK9 316 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 LOC102723532A0A0G2JNH3 316 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 A0A0J9YVX5 310 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 HYKKA2RU49 373 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 VSTM2BA6NLU5 285 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 C9J4A7 227 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 H0YGG7 62 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 KATNA1O75449 491 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 CEACAM4O75871 244 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 SYF2O95926 243 aaKnown RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 ITGAXP20702 1163 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 GGT5P36269 586 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms