RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 PDAP1Q13442 181 aaKnown RBP28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 ATP1A4Q13733 1029 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 FKBP10Q96AY3 582 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 CCDC138Q96M89 665 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 DPH5Q9H2P9 285 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 WHRNQ9P202 907 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 ZFATQ9P243 1243 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 PDE10AQ9Y233 779 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 VWA7Q9Y334 891 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 CCDC88CQ9P219 2028 aa28.96■■■□□ 2.23
SSSCA1-207ENST00000533115 SLC16A5O15375 505 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 EIF2S1P05198 315 aaKnown RBP28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 FDXRP22570 491 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 MGAT5Q09328 741 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 CALCOCO2Q13137 446 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 THEMIS2Q5TEJ8 643 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 ZNF425Q6IV72 752 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 FAM45BPQ6NSW5 357 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 ASB18Q6ZVZ8 466 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 MED25Q71SY5 747 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 OVCH1Q7RTY7 1134 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 ZBED8Q8IZ13 594 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 TMEM102Q8N9M5 508 aaPredicted RBP28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 FAM45AQ8TCE6 357 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 PTERQ96BW5 349 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 IP6K3Q96PC2 410 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 PARVBQ9HBI1 364 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 MOCS1Q9NZB8 636 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 STOX2Q9P2F5 926 aaPredicted RBP28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 MED13Q9UHV7 2174 aa28.95■■■□□ 2.22
SSSCA1-207ENST00000533115 H0YGG7 62 aa28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 PYCARD-AS1I3L0S3 204 aa28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 ALBP02768 609 aa28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 IL2P60568 153 aa28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 ARF3P61204 181 aaPredicted RBP28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 MRGPREQ86SM8 312 aa28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 ZDHHC19Q8WVZ1 309 aaPredicted RBP28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 SLC25A23Q9BV35 468 aa28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 PCDHGA9Q9Y5G4 932 aaKnown RBP28.94■■■□□ 2.22
SSSCA1-207ENST00000533115 HEATR5BQ9P2D3 2071 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 TSPAN12O95859 305 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 EZRP15311 586 aaKnown RBP28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 RRADP55042 308 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 FOXL2P58012 376 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 KLRB1Q12918 225 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 COX15Q7KZN9 410 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 OLFM1Q99784 485 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 TRIM4Q9C037 500 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 WDR54Q9H977 334 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 CCDC177Q9NQR7 707 aaPredicted RBP28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 PSAT1Q9Y617 370 aa28.93■■■□□ 2.22
SSSCA1-207ENST00000533115 TENM4Q6N022 2769 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 PCSK5Q92824 1860 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 MED26O95402 600 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 PDGFAP04085 211 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 UMODP07911 640 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 OR1D4P47884 311 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 PGGT1BP53609 377 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 RELAQ04206 551 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 PRTGQ2VWP7 1150 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 DUPD1Q68J44 220 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 STRA8Q7Z7C7 330 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 SLC26A11Q86WA9 606 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 METTL27Q8N6F8 245 aaPredicted RBP28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 SLC26A1Q9H2B4 701 aa28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 CUEDC1Q9NWM3 386 aaPredicted RBP28.92■■■□□ 2.22
SSSCA1-207ENST00000533115 CEACAM4O75871 244 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 HIST1H2AGP0C0S8 130 aaPredicted RBP28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 HIST1H2ADP20671 130 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 CASRP41180 1078 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 TBPL1P62380 186 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 NKG7Q16617 165 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 PHKG1Q16816 387 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 MUM1Q2TAK8 710 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 MBOAT1Q6ZNC8 495 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 ADCK2Q7Z695 626 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 TMEM151BQ8IW70 566 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 DTWD1Q8N5C7 304 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 PYROXD1Q8WU10 500 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 HIST1H2AHQ96KK5 128 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 OR2A5Q96R48 311 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 HIST1H2AJQ99878 128 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 H2AFJQ9BTM1 129 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 PCBD2Q9H0N5 130 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 SYNPO2LQ9H987 977 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 MLXIPLQ9NP71 852 aa28.91■■■□□ 2.22
SSSCA1-207ENST00000533115 ANKRD12Q6UB98 2062 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 PEX12O00623 359 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 PGDP52209 483 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 EMP3P54852 163 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 PRAMEF13Q5VWM6 474 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 PRMT9Q6P2P2 845 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 AGTRAPQ6RW13 159 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 PPP1R32Q7Z5V6 425 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 ZC3HC1Q86WB0 502 aaKnown RBP28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 CSNK1A1LQ8N752 337 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 TEX19Q8NA77 164 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 RERGQ96A58 199 aaPredicted RBP28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 CABS1Q96KC9 395 aa28.9■■■□□ 2.22
SSSCA1-207ENST00000533115 C10orf90Q96M02 699 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms