RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 EEF1AKMT1Q8WVE0 214 aa17■□□□□ 0.31
SMG1-203ENST00000532700 SMPDL3AQ92484 453 aa17■□□□□ 0.31
SMG1-203ENST00000532700 EBNA1BP2Q99848 306 aaKnown RBP17■□□□□ 0.31
SMG1-203ENST00000532700 PLCD4Q9BRC7 762 aa17■□□□□ 0.31
SMG1-203ENST00000532700 IKZF3Q9UKT9 509 aa17■□□□□ 0.31
SMG1-203ENST00000532700 CHMP2BQ9UQN3 213 aa17■□□□□ 0.31
SMG1-203ENST00000532700 MRPS2Q9Y399 296 aaKnown RBP17■□□□□ 0.31
SMG1-203ENST00000532700 HECTD1Q9ULT8 2610 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 HYKKA2RU49 373 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 CLEC18AA5D8T8 446 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 HAT1O14929 419 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 PFDN6O15212 129 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 TTI1O43156 1089 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 FKBP9O95302 570 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 AHSGP02765 367 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 CATP04040 527 aaKnown RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 MPC1LP0DKB6 136 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 CMPK1P30085 196 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 RPA3P35244 121 aaPredicted RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 ELK3P41970 407 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 SKIV2L2P42285 1042 aaKnown RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 ARSFP54793 590 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 DR1Q01658 176 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 FASTKD3Q14CZ7 662 aaKnown RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 SLC6A19Q695T7 634 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 JMJD6Q6NYC1 403 aaPredicted RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 CLEC18BQ6UXF7 455 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 PCGF5Q86SE9 256 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 PRSS58Q8IYP2 241 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 CLEC18CQ8NCF0 446 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 FBXO15Q8NCQ5 510 aaPredicted RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 MAGEC3Q8TD91 643 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 INPP5DQ92835 1189 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 FKBP10Q96AY3 582 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 PTERQ96BW5 349 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 CFAP36Q96G28 342 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 SMAD5Q99717 465 aaKnown RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 ZFYVE21Q9BQ24 234 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 FAM167BQ9BTA0 163 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 MRPS30Q9NP92 439 aaKnown RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 GPR83Q9NYM4 423 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 FBXL4Q9UKA2 621 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 RUVBL1Q9Y265 456 aaKnown RBP16.99■□□□□ 0.31
SMG1-203ENST00000532700 VPS9D1Q9Y2B5 631 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 CSAG2Q9Y5P2 127 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 HS3ST3B1Q9Y662 390 aa16.99■□□□□ 0.31
SMG1-203ENST00000532700 COL12A1Q99715 3063 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 VSTM2BA6NLU5 285 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 SMAPO00193 183 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 TSPAN12O95859 305 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 CARSP49589 748 aaKnown RBP16.98■□□□□ 0.31
SMG1-203ENST00000532700 Q0VFX4 171 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 PHKG1Q16816 387 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 TCTE1Q5JU00 501 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 HIBCHQ6NVY1 386 aaPredicted RBP16.98■□□□□ 0.31
SMG1-203ENST00000532700 PAQR3Q6TCH7 311 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 KIRREL2Q6UWL6 708 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 UBE2R2Q712K3 238 aaPredicted RBP16.98■□□□□ 0.31
SMG1-203ENST00000532700 LAPTM4BQ86VI4 370 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 CNTN4Q8IWV2 1026 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 GALNT16Q8N428 558 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 TTC29Q8NA56 475 aaPredicted RBP16.98■□□□□ 0.31
SMG1-203ENST00000532700 OR2A5Q96R48 311 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 SLC26A1Q9H2B4 701 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 ZNF552Q9H707 407 aaPredicted RBP16.98■□□□□ 0.31
SMG1-203ENST00000532700 KLHL42Q9P2K6 505 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 PDE10AQ9Y233 779 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 MRFAP1Q9Y605 127 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 PSAT1Q9Y617 370 aa16.98■□□□□ 0.31
SMG1-203ENST00000532700 SRPX2O60687 465 aaPredicted RBP16.97■□□□□ 0.31
SMG1-203ENST00000532700 PRDX1Q06830 199 aaKnown RBP16.97■□□□□ 0.31
SMG1-203ENST00000532700 ARHGAP19Q14CB8 494 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 SYT16Q17RD7 645 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 TTLL9Q3SXZ7 439 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 VWA2Q5GFL6 755 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 SPANXN3Q5MJ09 141 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 ANKMY2Q8IV38 441 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 RAB42Q8N4Z0 105 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 AMER3Q8N944 861 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 SPATA4Q8NEY3 305 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 CERS2Q96G23 380 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 OLFM1Q99784 485 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 MACROD1Q9BQ69 325 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 C17orf62Q9BQA9 187 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 TRIM31Q9BZY9 425 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 CCDC68Q9H2F9 335 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 WDR54Q9H977 334 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 FAM114A2Q9NRY5 505 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 ZNF451Q9Y4E5 1061 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 TEX264Q9Y6I9 313 aa16.97■□□□□ 0.31
SMG1-203ENST00000532700 TTLL8A6PVC2 850 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 AGPSO00116 658 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 FOXS1O43638 330 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 VPS26AO75436 327 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 PIAS1O75925 651 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 MMP11P24347 488 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 ITGA8P53708 1063 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 RRADP55042 308 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 TBPL1P62380 186 aa16.96■□□□□ 0.31
SMG1-203ENST00000532700 CKAP4Q07065 602 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms