RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 MROH9Q5TGP6 573 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 RHBDD2Q6NTF9 364 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 PCSK4Q6UW60 755 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 LCTLQ6UWM7 567 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 TRMT10CQ7L0Y3 403 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ISCA2Q86U28 154 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 GSPT2Q8IYD1 628 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 KLHDC8AQ8IYD2 350 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 CENPLQ8N0S6 344 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ARHGEF39Q8N4T4 335 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 UHMK1Q8TAS1 419 aaKnown RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 CT55Q8WUE5 264 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 DCAKDQ8WVC6 231 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ISL2Q96A47 359 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 PYCR2Q96C36 320 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 HIST1H2AHQ96KK5 128 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 OR2A5Q96R48 311 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 HIST1H2AJQ99878 128 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 H2AFJQ9BTM1 129 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 CHST8Q9H2A9 424 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 CCDC177Q9NQR7 707 aaPredicted RBP13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 ANKMY1Q9P2S6 941 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 CTNNAL1Q9UBT7 734 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 CROTQ9UKG9 612 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 OARD1Q9Y530 152 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 PCDHGA6Q9Y5G7 932 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 AP1M2Q9Y6Q5 423 aa13.35□□□□□ -0.27
TSPAN4-220ENST00000532375 A0A0J9YVX5 310 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 H7BY64 318 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 TAPBPO15533 448 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 ZSCAN9O15535 394 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 GUCA1CO95843 209 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 ONECUT2O95948 504 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 CRABP2P29373 138 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 DLSTP36957 453 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 SLC26A3P40879 764 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 PMS2P54278 862 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 ATP6V0D1P61421 351 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 CSNK1G2P78368 415 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 TSTA3Q13630 321 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 TGFBIQ15582 683 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 PRTGQ2VWP7 1150 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 C18orf21Q32NC0 220 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 PRAMEF13Q5VWM6 474 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 TLDC1Q6P9B6 456 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 ADAMTSL2Q86TH1 951 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 ZNF655Q8N720 491 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 ABHD11Q8NFV4 315 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 OR4K1Q8NGD4 311 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 KIAA1191Q96A73 305 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 RHBDF1Q96CC6 855 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 PRAP1Q96NZ9 151 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 GPR78Q96P69 363 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 GBP5Q96PP8 586 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 PAFAH2Q99487 392 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 TRIM54Q9BYV2 358 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 PCBD2Q9H0N5 130 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 GPN2Q9H9Y4 310 aaPredicted RBP13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 SLC22A11Q9NSA0 550 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 STARD5Q9NSY2 213 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 TMEM184CQ9NVA4 438 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 SNX7Q9UNH6 387 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 MRPS18BQ9Y676 258 aaKnown RBP13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 ATMQ13315 3056 aa13.34□□□□□ -0.27
TSPAN4-220ENST00000532375 FAM208BQ5VWN6 2430 aa13.33□□□□□ -0.27
TSPAN4-220ENST00000532375 A0A087WUV0 522 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 H0YGG7 62 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 NKX2-8O15522 239 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 CCNDBP1O95273 360 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 CCNYL3P0C7X3 344 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 TCN2P20062 427 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 CCND1P24385 295 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 GGT5P36269 586 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 SLC6A12P48065 614 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 ARF3P61204 181 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 SNRPNP63162 240 aaKnown RBP13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 CYP4F2P78329 520 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 IRF9Q00978 393 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 DNASE1L3Q13609 305 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 CSHL1Q14406 222 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 PTCHD3Q3KNS1 767 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 CRTC2Q53ET0 693 aaPredicted RBP13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 WASHC2DQ5SRD0 308 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 FAM198BQ6UWH4 519 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 PLD3Q8IV08 490 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 TMEM151BQ8IW70 566 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 GPR135Q8IZ08 494 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 DTWD1Q8N5C7 304 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 TTC9Q92623 222 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 NXNL1Q96CM4 212 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 ATOH8Q96SQ7 321 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 ZFYVE21Q9BQ24 234 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 SELENOSQ9BQE4 189 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 SNX15Q9NRS6 342 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 ABCF3Q9NUQ8 709 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 DHCR7Q9UBM7 475 aaKnown RBP13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 ZNF180Q9UJW8 692 aa13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 RALYQ9UKM9 306 aaKnown RBP13.33□□□□□ -0.28
TSPAN4-220ENST00000532375 IGSF10Q6WRI0 2623 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms