RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 HAUS8Q9BT25 410 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 DPH7Q9BTV6 452 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 SARGQ9BW04 601 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 APMAPQ9HDC9 416 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 MRPS30Q9NP92 439 aaKnown RBP13.9□□□□□ -0.18
CPSF1-206ENST00000531480 FGF21Q9NSA1 209 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 SLC39A1Q9NY26 324 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 B3GALT1Q9Y5Z6 326 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 APC2O95996 2303 aa13.9□□□□□ -0.18
CPSF1-206ENST00000531480 AHCTF1Q8WYP5 2266 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 TMEM8BA6NDV4 472 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 POLR1CO15160 346 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-206ENST00000531480 HCRTR1O43613 425 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 CTSVO60911 334 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 MT-ND3P03897 115 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 CD82P27701 267 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 RBMS1P29558 406 aaKnown RBP13.89□□□□□ -0.19
CPSF1-206ENST00000531480 SLC5A2P31639 672 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 GCGRP47871 477 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 GLRBP48167 497 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 SLC18A2Q05940 514 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 PCDH1Q08174 1060 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 CYP4F3Q08477 520 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 ZNF844Q08AG5 666 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 TUBB3Q13509 450 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 E2F2Q14209 437 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 TNFAIP8L3Q5GJ75 292 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 DCAF12Q5T6F0 453 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 RNF44Q7L0R7 432 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 TRABD2AQ86V40 505 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 OR4K1Q8NGD4 311 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 SNIP1Q8TAD8 396 aaKnown RBP13.89□□□□□ -0.19
CPSF1-206ENST00000531480 USP7Q93009 1102 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 PYCR2Q96C36 320 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 OR6C1Q96RD1 312 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 EGFL8Q99944 293 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 MRPL57Q9BQC6 102 aaKnown RBP13.89□□□□□ -0.19
CPSF1-206ENST00000531480 ACAT2Q9BWD1 397 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 KLHL25Q9H0H3 589 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 THSD1Q9NS62 852 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 PCMTD2Q9NV79 361 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 TMEM184CQ9NVA4 438 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 SOHLH2Q9NX45 425 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 MKS1Q9NXB0 559 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 FOXJ2Q9P0K8 574 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 SNX7Q9UNH6 387 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 SH2B3Q9UQQ2 575 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 KLHL20Q9Y2M5 609 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 TMEM184BQ9Y519 407 aaPredicted RBP13.89□□□□□ -0.19
CPSF1-206ENST00000531480 AK5Q9Y6K8 562 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 ZFHX4Q86UP3 3567 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 ACACAQ13085 2346 aa13.89□□□□□ -0.19
CPSF1-206ENST00000531480 UBXN8O00124 270 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 MAP3K7O43318 606 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 NRP2O60462 931 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 PYGBP11216 843 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 EZRP15311 586 aaKnown RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 ARL4DP49703 201 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 MAPK10P53779 464 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 ALDH18A1P54886 795 aaKnown RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 SETDB1Q15047 1291 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 GPR19Q15760 415 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 C18orf21Q32NC0 220 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 TMEM164Q5U3C3 297 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 FBXO42Q6P3S6 717 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 THOC6Q86W42 341 aaKnown RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 C17orf64Q86WR6 236 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 PPP1R3BQ86XI6 285 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 KDF1Q8NAX2 398 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 MDM1Q8TC05 714 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 MED8Q96G25 268 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 MRPL46Q9H2W6 279 aaKnown RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 CCDC86Q9H6F5 360 aaKnown RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 CNOT10Q9H9A5 744 aaKnown RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 CUEDC1Q9NWM3 386 aaPredicted RBP13.88□□□□□ -0.19
CPSF1-206ENST00000531480 CD274Q9NZQ7 290 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 XPR1Q9UBH6 696 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 DCDC2Q9UHG0 476 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 RARRES3Q9UL19 164 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 TMCO1Q9UM00 188 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 PLCL2Q9UPR0 1127 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 SLC22A14Q9Y267 594 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 SSUH2Q9Y2M2 353 aa13.88□□□□□ -0.19
CPSF1-206ENST00000531480 KCNE1BA0A087WTH5 132 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 NCF1BA6NI72 391 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-206ENST00000531480 NCF1CA8MVU1 366 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-206ENST00000531480 FOXO6A8MYZ6 492 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 STK16O75716 305 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 DLGAP3O95886 979 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 NCF1P14598 390 aaPredicted RBP13.87□□□□□ -0.19
CPSF1-206ENST00000531480 KRT15P19012 456 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 CRHR1P34998 444 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 GDF5P43026 501 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 CSNK1G2P78368 415 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 NFKB2Q00653 900 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 FOXM1Q08050 763 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 MAP7Q14244 749 aa13.87□□□□□ -0.19
CPSF1-206ENST00000531480 PCBP2Q15366 365 aaKnown RBP eCLIP13.87□□□□□ -0.19
CPSF1-206ENST00000531480 ZC3H12BQ5HYM0 836 aaKnown RBP13.87□□□□□ -0.19
CPSF1-206ENST00000531480 THEMIS2Q5TEJ8 643 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms