RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PCDHGB6Q9Y5F9 930 aa8.78□□□□□ -1
NEDD8-206ENST00000531430 NFS1Q9Y697 457 aa8.78□□□□□ -1
NEDD8-206ENST00000531430 ZFHX3Q15911 3703 aa8.78□□□□□ -1
NEDD8-206ENST00000531430 NF1P21359 2839 aa8.77□□□□□ -1
NEDD8-206ENST00000531430 PCM1Q15154 2024 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 A0A0A6YYC8 382 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 RCCD1A6NED2 376 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 I3L1I5 382 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 PRPF4O43172 522 aaKnown RBP eCLIP8.77□□□□□ -1.011e-7■□□□□ 8.7
NEDD8-206ENST00000531430 PSMD3O43242 534 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 TJP3O95049 919 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 STATHP02808 62 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 C8orf89P0DMQ9 161 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 CD46P15529 392 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 EEF1DP29692 281 aaKnown RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 CMPK1P30085 196 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 FOXN2P32314 431 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 PPARGP37231 505 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 ANP32AP39687 249 aaKnown RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 ART1P52961 327 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 AP2B1P63010 937 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 PRAMEP78395 509 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 MAT1AQ00266 395 aaKnown RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 FASTKQ14296 549 aaKnown RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 GRB7Q14451 532 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 HKDC1Q2TB90 917 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 BTBD16Q32M84 506 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 MINDY4Q4G0A6 757 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 KRTCAP3Q53RY4 240 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 SPINK14Q6IE38 97 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 UNC5DQ6UXZ4 953 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 PPP1R21Q6ZMI0 780 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 RIPOR1Q6ZS17 1223 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 ADCK2Q7Z695 626 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 CSNK1A1LQ8N752 337 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 OR2L3Q8NG85 312 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 OR4L1Q8NH43 312 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 LKAAEAR1Q8TD35 194 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 RERGQ96A58 199 aaPredicted RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 ZNF354BQ96LW1 612 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 FOPNLQ96NB1 174 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 ZNF285Q96NJ3 590 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 C19orf43Q9BQ61 176 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 UTP23Q9BRU9 249 aaKnown RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 CARD6Q9BX69 1037 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 HES7Q9BYE0 225 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 MCCC2Q9HCC0 563 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 ABHD10Q9NUJ1 306 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 COQ3Q9NZJ6 369 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 SLC2A6Q9UGQ3 507 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 INTUQ9ULD6 942 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 RUVBL2Q9Y230 463 aaKnown RBP8.77□□□□□ -1.01
NEDD8-206ENST00000531430 MEMO1Q9Y316 297 aa8.77□□□□□ -1.01
NEDD8-206ENST00000531430 OR2W5A6NFC9 320 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 PRRG2O14669 202 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 CBFA2T2O43439 604 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 ASNA1O43681 348 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 VPS26AO75436 327 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 C1orf105O95561 183 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 AGAP20933 346 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 RPA3P35244 121 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-206ENST00000531430 CD96P40200 585 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 COPS2P61201 443 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 HSF1Q00613 529 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 ACTN3Q08043 901 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-206ENST00000531430 TRIM14Q14142 442 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 PCOLCEQ15113 449 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 TESK1Q15569 626 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 MAPKAPK3Q16644 382 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 ACER2Q5QJU3 275 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 AFTPHQ6ULP2 937 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 SUSD1Q6UWL2 747 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 PACS1Q6VY07 963 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 SPNS3Q6ZMD2 512 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 CEP128Q6ZU80 1094 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-206ENST00000531430 BEST3Q8N1M1 668 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 OTUD6BQ8N6M0 293 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 AGAP11Q8TF27 550 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 C10orf90Q96M02 699 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 GPR137Q96N19 417 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 SIGLEC12Q96PQ1 595 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 SPOCK3Q9BQ16 436 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 ZFYVE21Q9BQ24 234 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 TUBB6Q9BUF5 446 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 MENTQ9BUN1 341 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 RAB11FIP5Q9BXF6 653 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 ZNF700Q9H0M5 742 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 MRPS30Q9NP92 439 aaKnown RBP8.76□□□□□ -1.01
NEDD8-206ENST00000531430 MKKSQ9NPJ1 570 aaPredicted RBP8.76□□□□□ -1.01
NEDD8-206ENST00000531430 PPT2Q9UMR5 302 aa8.76□□□□□ -1.01
NEDD8-206ENST00000531430 RUVBL1Q9Y265 456 aaKnown RBP8.76□□□□□ -1.01
NEDD8-206ENST00000531430 GTF3C1Q12789 2109 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 GOLGA6L9A6NEM1 432 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 MROH6A6NGR9 719 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 SOWAHDA6NJG2 315 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 E7EVH7 732 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 FANCGO15287 622 aa8.75□□□□□ -1.01
NEDD8-206ENST00000531430 PJA2O43164 708 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms