RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TAS2R39P59534 338 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 ABATP80404 500 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PTPN11Q06124 597 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SP140Q13342 867 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 MTMR1Q13613 665 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 VEPH1Q14D04 833 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PCBP1Q15365 356 aaKnown RBP eCLIP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SOWAHCQ53LP3 525 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 RUNDC3AQ59EK9 446 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PABPC1L2AQ5JQF8 200 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 FAHD1Q6P587 224 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 RTL4Q6ZR62 310 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 LAX1Q8IWV1 398 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 OR4D10Q8NGI6 311 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 GGHQ92820 318 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 TEX37Q96LM6 180 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SOSTQ9BQB4 213 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 MSTO1Q9BUK6 570 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 NUSAP1Q9BXS6 441 aaKnown RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 MRPL4Q9BYD3 311 aaKnown RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 MIOSQ9NXC5 875 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SPASTQ9UBP0 616 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 OTOFQ9HC10 1997 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 A0A1W2PPL8 197 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 DFFAO00273 331 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 EPHA5P54756 1037 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 HSF2Q03933 536 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SIM2Q14190 667 aaPredicted RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF460Q14592 562 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PAFAH1B3Q15102 231 aaKnown RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SMAD1Q15797 465 aaKnown RBP7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PTCHD3Q3KNS1 767 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SEZ6Q53EL9 994 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 HSDL2Q6YN16 418 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 ACER1Q8TDN7 264 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SLC9A6Q92581 669 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 ITCHQ96J02 903 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SENP8Q96LD8 212 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 KCNJ15Q99712 375 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 PTPRHQ9HD43 1115 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SETD4Q9NVD3 440 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 ADAM30Q9UKF2 790 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 BAIAP2Q9UQB8 552 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 MAB21L2Q9Y586 359 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 COMMD10Q9Y6G5 202 aa7.91□□□□□ -1.14
CSDE1-214ENST00000530886 SMLR1H3BR10 107 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 MSCO60682 206 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SNAPC5O75971 98 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SRCP12931 536 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CD19P15391 556 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 GPC1P35052 558 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 NOS2P35228 1153 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 ALDH9A1P49189 494 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CLCN5P51795 746 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 DCDC1P59894 354 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CREMQ03060 361 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 OTUD1Q5VV17 481 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 METAP1DQ6UB28 335 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 USP45Q70EL2 814 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 LUZP2Q86TE4 346 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SRFBP1Q8NEF9 429 aaKnown RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 OR2T12Q8NG77 320 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CDC26Q8NHZ8 85 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 ST8SIA2Q92186 375 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 UPRTQ96BW1 309 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CD244Q9BZW8 370 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 PORCNQ9H237 461 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 MIXL1Q9H2W2 232 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CLEC4MQ9H2X3 399 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 RGS18Q9NS28 235 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SDHAF2Q9NX18 166 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 ERAP1Q9NZ08 941 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 EPHA6Q9UF33 1036 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 MGAT4AQ9UM21 535 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 GINS2Q9Y248 185 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 NME7Q9Y5B8 376 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 TNS1Q9HBL0 1735 aaKnown RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 A0A096LPI6 279 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SGK494L7N484 410 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 DNASE2O00115 360 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SIGLEC6O43699 453 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CHP2O43745 196 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 MFSD11O43934 449 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 WDR47O94967 919 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 MPC2O95563 127 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 C21orf33P30042 268 aaPredicted RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SCNN1AP37088 669 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 RPS19P39019 145 aaKnown RBP7.9□□□□□ -1.14
CSDE1-214ENST00000530886 ERVFC1P60507 584 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CDO1Q16878 200 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 ZNF699Q32M78 642 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CERCAMQ5T4B2 595 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 METTL11BQ5VVY1 283 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 BICRALQ6AI39 1079 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 PRR5LQ6MZQ0 368 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SCYL2Q6P3W7 929 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 RNF135Q8IUD6 432 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 ZDHHC17Q8IUH5 632 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 SPNS2Q8IVW8 549 aa7.9□□□□□ -1.14
CSDE1-214ENST00000530886 CLDN22Q8N7P3 220 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms