RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 RHBGQ9H310 441 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 RNF6Q9Y252 685 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 FER1L6Q2WGJ9 1857 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 STK25O00506 426 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 SOCS7O14512 581 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 CLDN11O75508 207 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 PTGS2P35354 604 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 SLX4IPQ5VYV7 408 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 MSANTD2Q6P1R3 559 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 PNCKQ6P2M8 343 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 LYPD8Q6UX82 237 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 NRARPQ7Z6K4 114 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 TMPRSS11BQ86T26 416 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 RBFAQ8N0V3 343 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 FBXO22Q8NEZ5 403 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 VANGL1Q8TAA9 524 aaPredicted RBP17.42■□□□□ 0.38
LTBP3-210ENST00000528516 RDH12Q96NR8 316 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 MAT2BQ9NZL9 334 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 GABRQQ9UN88 632 aa17.42■□□□□ 0.38
LTBP3-210ENST00000528516 ELOVL7A1L3X0 281 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 MAFKO60675 156 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 NOS1APO75052 506 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 HPRP00739 348 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 CTSKP43235 329 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 YBEYP58557 167 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 ZNF45Q02386 682 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 USP45Q70EL2 814 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 BEND7Q8N7W2 519 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 OR5K1Q8NHB7 308 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 TRNT1Q96Q11 434 aaKnown RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 KRT84Q9NSB2 600 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 USP3Q9Y6I4 520 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 HNRNPCL2B2RXH8 293 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 MAPK1P28482 360 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 SNRPD2P62316 118 aaKnown RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 CHRNEQ04844 493 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 TIGD6Q17RP2 521 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 SPANXN4Q5MJ08 99 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 B3GNT8Q7Z7M8 397 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 KCTD13Q8WZ19 329 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 ZNF300Q96RE9 604 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 ITPAQ9BY32 194 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 GPR62Q9BZJ7 368 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 BRD9Q9H8M2 597 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 MRPL17Q9NRX2 175 aaKnown RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 K7ERQ8 282 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 PRDX3P30048 256 aaKnown RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 CHIT1Q13231 466 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 RFX4Q33E94 735 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 NXNL2Q5VZ03 156 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 NUDT8Q8WV74 236 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 KAT2AQ92830 837 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 NFKBIZQ9BYH8 718 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 ZDHHC4Q9NPG8 344 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 AASDHPPTQ9NRN7 309 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 NUFIP1Q9UHK0 495 aaKnown RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 IKZF3Q9UKT9 509 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 MAP4K5Q9Y4K4 846 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 PEX16Q9Y5Y5 336 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 SCO2O43819 266 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 CCND3P30281 292 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 NUDT6P53370 316 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 C2CD4AQ8NCU7 369 aaPredicted RBP17.41■□□□□ 0.38
LTBP3-210ENST00000528516 OR6F1Q8NGZ6 308 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 SNAPC3Q92966 411 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 CCNB1IP1Q9NPC3 277 aa17.41■□□□□ 0.38
LTBP3-210ENST00000528516 SERPINA1P01009 418 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 CATP04040 527 aaKnown RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 HOXB8P17481 243 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 ATF4P18848 351 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 PCMT1P22061 227 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 PPP2R2BQ00005 443 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 IL10RBQ08334 325 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 MAD2L1Q13257 205 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 SOWAHCQ53LP3 525 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 ZNF691Q5VV52 312 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 LINC00299Q6ZSB3 139 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 ZNF438Q7Z4V0 828 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 VN1R5Q7Z5H4 357 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 SPATA19Q7Z5L4 167 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 NECTIN4Q96NY8 510 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 H2AFY2Q9P0M6 372 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 CCDC182A6NF36 153 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 UROSP10746 265 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 RRM2P31350 389 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 KIR3DL1P43629 444 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 GALK2Q01415 458 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 PIK3R6Q5UE93 754 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 ZNF605Q86T29 641 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 TTC29Q8NA56 475 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 CD99L2Q8TCZ2 262 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 SLC38A4Q969I6 547 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 COPS4Q9BT78 406 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 RANGRFQ9HD47 186 aaPredicted RBP17.4■□□□□ 0.38
LTBP3-210ENST00000528516 SSC5DA1L4H1 1573 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 FAM92AA1XBS5 289 aa17.4■□□□□ 0.38
LTBP3-210ENST00000528516 DCTP40126 519 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms