RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RNF44Q7L0R7 432 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 KCNMB4Q86W47 210 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 C8orf44Q96CB5 159 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 UTP6Q9NYH9 597 aaKnown RBP21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 TRPC4Q9UBN4 977 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 VPS9D1Q9Y2B5 631 aa21.34■■□□□ 1.01
TRAPPC4-208ENST00000527680 CTAGE9A4FU28 777 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 WIPF3A6NGB9 483 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 ARHGEF33A8MVX0 844 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 UQCRHP07919 91 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 CCDC175P0C221 793 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 OGNP20774 298 aaKnown RBP21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 ATP5DP30049 168 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 EMP2P54851 167 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 ADARP55265 1226 aaKnown RBP21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 GPS1Q13098 491 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 KIAA0930Q6ICG6 404 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 LAPTM4BQ86VI4 370 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 ST6GALNAC3Q8NDV1 305 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 GRHL3Q8TE85 626 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 RERGQ96A58 199 aaPredicted RBP21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 LMF1Q96S06 567 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 PKP4Q99569 1192 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 BARD1Q99728 777 aaKnown RBP21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 PLCD4Q9BRC7 762 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 MESP1Q9BRJ9 268 aa21.33■■□□□ 1.01
TRAPPC4-208ENST00000527680 SVILO95425 2214 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 NSG1A0A0A6YYJ2 146 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 ZNF839A8K0R7 811 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 PRPF4O43172 522 aaKnown RBP eCLIP21.32■■□□□ 12e-7■■■■□ 24.1
TRAPPC4-208ENST00000527680 KLHL18O94889 574 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 SYF2O95926 243 aaKnown RBP21.32■■□□□ 1
TRAPPC4-208ENST00000527680 HSD17B2P37059 387 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 TSFMP43897 325 aaKnown RBP21.32■■□□□ 1
TRAPPC4-208ENST00000527680 PNLIPRP1P54315 467 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 Q0VFX4 171 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 THOC5Q13769 683 aaKnown RBP21.32■■□□□ 1
TRAPPC4-208ENST00000527680 DHX34Q14147 1143 aaKnown RBP21.32■■□□□ 1
TRAPPC4-208ENST00000527680 GBX1Q14549 363 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 ARHGAP19Q14CB8 494 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 TTLL9Q3SXZ7 439 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.32■■□□□ 1
TRAPPC4-208ENST00000527680 FAAH2Q6GMR7 532 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 CENPUQ71F23 418 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 ADCK2Q7Z695 626 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 CILP2Q8IUL8 1156 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 KBTBD2Q8IY47 623 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 CSNK1A1LQ8N752 337 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 CATSPER1Q8NEC5 780 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 MMABQ96EY8 250 aaPredicted RBP21.32■■□□□ 1
TRAPPC4-208ENST00000527680 CCDC68Q9H2F9 335 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 TAC3Q9UHF0 121 aa21.32■■□□□ 1
TRAPPC4-208ENST00000527680 FFAR3O14843 346 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 GPR42O15529 346 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 PHF2O75151 1096 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 PSIP1O75475 530 aaKnown RBP21.31■■□□□ 1
TRAPPC4-208ENST00000527680 USP1O94782 785 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 CCNDBP1O95273 360 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 CLDN1O95832 211 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 ANXA5P08758 320 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 ARG2P78540 354 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 PRDX1Q06830 199 aaKnown RBP21.31■■□□□ 1
TRAPPC4-208ENST00000527680 MFAP5Q13361 173 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 PRTGQ2VWP7 1150 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 THEMIS2Q5TEJ8 643 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 ATG9BQ674R7 924 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 NDUFAF7Q7L592 441 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 REXO1L1PQ8IX06 675 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 PPFIBP2Q8ND30 876 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 TRIM58Q8NG06 486 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 OR1N1Q8NGS0 311 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 FAR1Q8WVX9 515 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 C10orf90Q96M02 699 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 INTS10Q9NVR2 710 aaKnown RBP21.31■■□□□ 1
TRAPPC4-208ENST00000527680 OSGIN2Q9Y236 505 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 RUVBL1Q9Y265 456 aaKnown RBP21.31■■□□□ 1
TRAPPC4-208ENST00000527680 HEATR5BQ9P2D3 2071 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 ZGRF1Q86YA3 2104 aa21.31■■□□□ 1
TRAPPC4-208ENST00000527680 NBPF19A0A087WUL8 3843 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 MAGEB16A2A368 324 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 DYTNA2CJ06 578 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 IDSB3KWA1 339 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 MYO1CO00159 1063 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 KRT14P02533 472 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 HEXBP07686 556 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 EMP3P54852 163 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 HKDC1Q2TB90 917 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 ICE2Q659A1 982 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 B3GNTL1Q67FW5 361 aaPredicted RBP21.3■■□□□ 1
TRAPPC4-208ENST00000527680 ZNF787Q6DD87 383 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 ZNF470Q6ECI4 717 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 FAM180AQ6UWF9 173 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 PAQR7Q86WK9 346 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 PRELID2Q8N945 189 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 ZNF669Q96BR6 464 aaPredicted RBP21.3■■□□□ 1
TRAPPC4-208ENST00000527680 MAGEB10Q96LZ2 347 aaPredicted RBP21.3■■□□□ 1
TRAPPC4-208ENST00000527680 TRIM56Q9BRZ2 755 aaKnown RBP21.3■■□□□ 1
TRAPPC4-208ENST00000527680 PTGFRNQ9P2B2 879 aa21.3■■□□□ 1
TRAPPC4-208ENST00000527680 SDR42E2A6NKP2 422 aa21.29■■□□□ 1
TRAPPC4-208ENST00000527680 TXNDC9O14530 226 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms