RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 PTPN2P17706 415 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 TTKP33981 857 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 PLPP4Q5VZY2 271 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 XAF1Q6GPH4 301 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 ADNP2Q6IQ32 1131 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 SERPINA11Q86U17 422 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 SYT12Q8IV01 421 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 KLHDC8AQ8IYD2 350 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 CHDHQ8NE62 594 aaPredicted RBP17.02■□□□□ 0.32
USH1C-205ENST00000527020 TIFAQ96CG3 184 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 IL36AQ9UHA7 158 aa17.02■□□□□ 0.32
USH1C-205ENST00000527020 SLC5A10A0PJK1 596 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 ANKRD33BA6NCL7 494 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 TRIM64BA6NI03 449 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 FPGTO14772 594 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 ETHE1O95571 254 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 JUNBP17275 347 aaPredicted RBP17.02■□□□□ 0.31
USH1C-205ENST00000527020 BDKRB1P46663 353 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 TRPC1P48995 793 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 EPS8Q12929 822 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 NAE1Q13564 534 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 RBM48Q5RL73 367 aaKnown RBP17.02■□□□□ 0.31
USH1C-205ENST00000527020 AGTRAPQ6RW13 159 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 ARHGAP22Q7Z5H3 698 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 R3HCC1LQ7Z5L2 792 aaKnown RBP17.02■□□□□ 0.31
USH1C-205ENST00000527020 ZZZ3Q8IYH5 903 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 EID3Q8N140 333 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 ZNF557Q8N988 423 aaPredicted RBP17.02■□□□□ 0.31
USH1C-205ENST00000527020 OR13F1Q8NGS4 319 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 GLMNQ92990 594 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 VPS35Q96QK1 796 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 TUBA1CQ9BQE3 449 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 BTBD3Q9Y2F9 522 aa17.02■□□□□ 0.31
USH1C-205ENST00000527020 CLIC1O00299 241 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 PRMT3O60678 531 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 CCNDBP1O95273 360 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 KCNK5O95279 499 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ENGP17813 658 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 MAP4P27816 1152 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 MMP12P39900 470 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 PRLHRP49683 370 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 RAE1P78406 368 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 SRSF11Q05519 484 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 ZNF33BQ06732 778 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 SPIDRQ14159 915 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 DPY19L1Q2PZI1 675 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ZNF805Q5CZA5 627 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 GRHL2Q6ISB3 625 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 CLECL1Q8IZS7 167 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ZNF366Q8N895 744 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 MRPL43Q8N983 215 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 HDAC2Q92769 488 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 GLYATL1Q969I3 302 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 PANX1Q96RD7 426 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 DCUN1D5Q9BTE7 237 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 AASDHPPTQ9NRN7 309 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 MARK1Q9P0L2 795 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 TBC1D14Q9P2M4 693 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 U3KQV3 271 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 H0YIV9 168 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 HS6ST1O60243 411 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 SEMG1P04279 462 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 HTR1AP08908 422 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 GPX2P18283 190 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 EEF1B2P24534 225 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 IMPA1P29218 277 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 WEE1P30291 646 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 C21orf58P58505 322 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 CD47Q08722 323 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 DDX39BQ13838 428 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 MEP1AQ16819 746 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ARHGAP15Q53QZ3 475 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 LDLRAP1Q5SW96 308 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 C6orf141Q5SZD1 244 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ANKRD26P1Q6NSI1 321 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ZCCHC8Q6NZY4 707 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 LIPIQ6XZB0 460 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 PTOV1Q86YD1 416 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 DCP2Q8IU60 420 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 ZDHHC21Q8IVQ6 265 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 OR8J2Q8NGG1 315 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 CNDP2Q96KP4 475 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 CCDC138Q96M89 665 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 BARD1Q99728 777 aaKnown RBP17.01■□□□□ 0.31
USH1C-205ENST00000527020 FANCEQ9HB96 536 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 RAD18Q9NS91 495 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 DKK3Q9UBP4 350 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 GULP1Q9UBP9 304 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ABCG2Q9UNQ0 655 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 ITM2BQ9Y287 266 aa17.01■□□□□ 0.31
USH1C-205ENST00000527020 E2F6O75461 281 aa17■□□□□ 0.31
USH1C-205ENST00000527020 FGF19O95750 216 aa17■□□□□ 0.31
USH1C-205ENST00000527020 SLC16A8O95907 504 aa17■□□□□ 0.31
USH1C-205ENST00000527020 MATN1P21941 496 aa17■□□□□ 0.31
USH1C-205ENST00000527020 PDHA2P29803 388 aa17■□□□□ 0.31
USH1C-205ENST00000527020 STT3AP46977 705 aa17■□□□□ 0.31
USH1C-205ENST00000527020 NUP107P57740 925 aa17■□□□□ 0.31
USH1C-205ENST00000527020 PCDH1Q08174 1060 aa17■□□□□ 0.31
USH1C-205ENST00000527020 GRSF1Q12849 480 aaKnown RBP eCLIP17■□□□□ 0.31
USH1C-205ENST00000527020 GRIN2CQ14957 1233 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms