RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 STAG3L4Q8TBR4 150 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 MGARPQ8TDB4 240 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 MCOLN3Q8TDD5 553 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 NEIL2Q969S2 332 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 COL26A1Q96A83 441 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 MED8Q96G25 268 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 CCDC138Q96M89 665 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 FOPNLQ96NB1 174 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 TRAPPC9Q96Q05 1148 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 CDC6Q99741 560 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 MACROD1Q9BQ69 325 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 MRPL57Q9BQC6 102 aaKnown RBP6.24□□□□□ -1.41
CD44-214ENST00000525211 GATA5Q9BWX5 397 aaPredicted RBP6.24□□□□□ -1.41
CD44-214ENST00000525211 SHCBP1LQ9BZQ2 653 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 C20orf27Q9GZN8 174 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 MRPL46Q9H2W6 279 aaKnown RBP6.24□□□□□ -1.41
CD44-214ENST00000525211 GSTO2Q9H4Y5 243 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 VIPAS39Q9H9C1 493 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 PPCSQ9HAB8 311 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 APMAPQ9HDC9 416 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 ARGLU1Q9NWB6 273 aaPredicted RBP6.24□□□□□ -1.41
CD44-214ENST00000525211 NUDT4Q9NZJ9 180 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 NCKIPSDQ9NZQ3 722 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 SPATA7Q9P0W8 599 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 PDP2Q9P2J9 529 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 EPHA6Q9UF33 1036 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 POLG2Q9UHN1 485 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 PCTPQ9UKL6 214 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 SLC22A14Q9Y267 594 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 ADAMTS20P59510 1910 aa6.24□□□□□ -1.41
CD44-214ENST00000525211 KCNE1BA0A087WTH5 132 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 LOC105369274A0A096LPK9 316 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 LOC102723532A0A0G2JNH3 316 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 TMEM120BA0PK00 339 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 CCDC189A1A4V9 331 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 C4orf51C9J302 202 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 E7EQ34 232 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 H3BMH7 237 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 H7BY64 318 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 P2RX6O15547 441 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 ITM2AO43736 263 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 FOXD2O60548 495 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 CCNT2O60583 730 aaKnown RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 DNAJB6O75190 326 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 CSO75390 466 aaKnown RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 LYPLA1O75608 230 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 WDR47O94967 919 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 TBX6O95947 436 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 B3GALT4O96024 378 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 GP1BAP07359 652 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 CHRNGP07510 517 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 GSTA1P08263 222 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 RPS17P08708 135 aaKnown RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 ANXA5P08758 320 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 ENO2P09104 434 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 RBP1P09455 135 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 EBLN1P0CF75 366 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 THRAP10827 490 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 FGF3P11487 239 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 CEACAM1P13688 526 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 CPA3P15088 417 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 ITIH1P19827 911 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 MAP4P27816 1152 aaKnown RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 OAS2P29728 719 aaKnown RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 GGT5P36269 586 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 PIK3CGP48736 1102 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 HTR6P50406 440 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 DUSP3P51452 185 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 PRKAA2P54646 552 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 FOXA1P55317 472 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 CSNK1G2P78368 415 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 TARDBPQ13148 414 aaKnown RBP eCLIP6.23□□□□□ -1.41
CD44-214ENST00000525211 BIRC2Q13490 618 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 GPR19Q15760 415 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 TSNAXIP1Q2TAA8 658 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 INAVAQ3KP66 663 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 TCHHL1Q5QJ38 904 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 ZNF678Q5SXM1 525 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 CACHD1Q5VU97 1274 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 PRAMEF13Q5VWM6 474 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 SULT1C3Q6IMI6 304 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 FRMPD2BQ6IN97 320 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 ZNF425Q6IV72 752 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 TMEM71Q6P5X7 295 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 FIGLAQ6QHK4 219 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 SLCO4C1Q6ZQN7 724 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 FRA10AC1Q70Z53 315 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 GOLGA7Q7Z5G4 137 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 VN1R5Q7Z5H4 357 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 RAB44Q7Z6P3 723 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 PAQR7Q86WK9 346 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 RBM12BQ8IXT5 1001 aaKnown RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 OR4N4Q8N0Y3 316 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 FBXO39Q8N4B4 442 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 TEX9Q8N6V9 391 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 OR2L3Q8NG85 312 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 OR52B6Q8NGF0 335 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 OR6Y1Q8NGX8 325 aa6.23□□□□□ -1.41
CD44-214ENST00000525211 ZNF483Q8TF39 744 aaPredicted RBP6.23□□□□□ -1.41
CD44-214ENST00000525211 UBTD2Q8WUN7 234 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms