RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 SPNS2Q8IVW8 549 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 CPNE9Q8IYJ1 553 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 OR4N4Q8N0Y3 316 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 FAM26EQ8N5C1 309 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 GALNT11Q8NCW6 608 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PPFIBP2Q8ND30 876 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ZNF480Q8WV37 535 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PKP4Q99569 1192 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 GPR21Q99679 349 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 PLCD4Q9BRC7 762 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 AARSD1Q9BTE6 412 aaKnown RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 DDX47Q9H0S4 455 aaKnown RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ZNF552Q9H707 407 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 C20orf96Q9NUD7 363 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 ASIC3Q9UHC3 531 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 CDC23Q9UJX2 597 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 FBXL4Q9UKA2 621 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 FBXO5Q9UKT4 447 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 MAP4K5Q9Y4K4 846 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 HS3ST3B1Q9Y662 390 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 MAU2Q9Y6X3 613 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 CPAMD8Q8IZJ3 1885 aa9.02□□□□□ -0.97
SF3B2-204ENST00000525207 USP9YO00507 2555 aaPredicted RBP9.02□□□□□ -0.97
SF3B2-204ENST00000525207 IGLV3-12A0A075B6K2 115 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 HYKKA2RU49 373 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 VSTM2BA6NLU5 285 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 CYSRT1A8MQ03 144 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 E7ENX8 843 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 H0YGG7 62 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 GFYI3L273 518 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 SMAPO00193 183 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 KLHL41O60662 606 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 ALOX12BO75342 701 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 VPS4BO75351 444 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 BANF1O75531 89 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 IPO13O94829 963 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 EZRP15311 586 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 TCP1P17987 556 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 SKIV2L2P42285 1042 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 EMP3P54852 163 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 ARF3P61204 181 aaPredicted RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 TBPL1P62380 186 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 TAP2Q03519 686 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 PRDX1Q06830 199 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 DHX9Q08211 1270 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 TSTA3Q13630 321 aaPredicted RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 DSG2Q14126 1118 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 TUBB8Q3ZCM7 444 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 HSP90AA5PQ58FG0 334 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 LRRC8EQ6NSJ5 796 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 PRMT9Q6P2P2 845 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 IGFL3Q6UXB1 125 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 PIWIL4Q7Z3Z4 852 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 CNTRLQ7Z7A1 2325 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 NAV2Q8IVL1 2488 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 CNTN4Q8IWV2 1026 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 LRRC56Q8IYG6 542 aaPredicted RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 ARHGEF39Q8N4T4 335 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 CSNK1A1LQ8N752 337 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 C2CD4AQ8NCU7 369 aaPredicted RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 ASB11Q8WXH4 323 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 MVB12AQ96EY5 273 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 CABS1Q96KC9 395 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 NDNQ99608 321 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 COL12A1Q99715 3063 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 CRB3Q9BUF7 120 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 SOX17Q9H6I2 414 aaPredicted RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 SLAMF7Q9NQ25 335 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 SEMA3GQ9NS98 782 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 IARS2Q9NSE4 1012 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 ZC3H7BQ9UGR2 993 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 PCYOX1Q9UHG3 505 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 VPS4AQ9UN37 437 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 RUVBL1Q9Y265 456 aaKnown RBP9.01□□□□□ -0.97
SF3B2-204ENST00000525207 DHRS7Q9Y394 339 aa9.01□□□□□ -0.97
SF3B2-204ENST00000525207 ICE1Q9Y2F5 2266 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 USP27XA6NNY8 438 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 HAT1O14929 419 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 P2RX6O15547 441 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 HAUS5O94927 633 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 TTC4O95801 387 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 SYF2O95926 243 aaKnown RBP9□□□□□ -0.97
SF3B2-204ENST00000525207 EIF2S1P05198 315 aaKnown RBP9□□□□□ -0.97
SF3B2-204ENST00000525207 FBLP22087 321 aaKnown RBP9□□□□□ -0.97
SF3B2-204ENST00000525207 GNLYP22749 145 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 ITGA3P26006 1051 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 ABATP80404 500 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 TIAL1Q01085 375 aaKnown RBP eCLIP9□□□□□ -0.97
SF3B2-204ENST00000525207 KLC1Q07866 573 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 SP140Q13342 867 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 INPP5JQ15735 1006 aaPredicted RBP9□□□□□ -0.97
SF3B2-204ENST00000525207 RBBP7Q16576 425 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 HKDC1Q2TB90 917 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 MSS51Q4VC12 460 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 SPANXN3Q5MJ09 141 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 RBM20Q5T481 1227 aaKnown RBP9□□□□□ -0.97
SF3B2-204ENST00000525207 GARNL3Q5VVW2 1013 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 PRAMEF13Q5VWM6 474 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 KIRREL2Q6UWL6 708 aa9□□□□□ -0.97
SF3B2-204ENST00000525207 SHISA6Q6ZSJ9 500 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms