RNA–Protein interactions for RNA: ENST00000525074.5

TRIM3-203, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRIM3, Length 3,044 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-203ENST00000525074 SEMA3DO95025 777 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
TRIM3-203ENST00000525074 CPSF4O95639 269 aaKnown RBP12.78□□□□□ -0.36
TRIM3-203ENST00000525074 OPN1SWP03999 348 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 IFI30P13284 250 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 OR1G1P47890 313 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 TUBA1BP68363 451 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 GALK2Q01415 458 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 FADDQ13158 208 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 PROX2Q3B8N5 592 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 ZNF544Q6NX49 715 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 AFTPHQ6ULP2 937 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 CD300LGQ6UXG3 332 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
TRIM3-203ENST00000525074 ZNF621Q6ZSS3 439 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 TUBA1AQ71U36 451 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 MAL2Q969L2 176 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 ST6GAL2Q96JF0 529 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 PHOX2BQ99453 314 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 CPPED1Q9BRF8 314 aaPredicted RBP12.78□□□□□ -0.36
TRIM3-203ENST00000525074 CCNB1IP1Q9NPC3 277 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 CCL27Q9Y4X3 112 aa12.78□□□□□ -0.36
TRIM3-203ENST00000525074 RFXANKO14593 260 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 OTCP00480 354 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 NUDT7P0C024 238 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 DNAJA1P31689 397 aaKnown RBP12.77□□□□□ -0.36
TRIM3-203ENST00000525074 ZNF140P52738 457 aaPredicted RBP12.77□□□□□ -0.36
TRIM3-203ENST00000525074 ZNF45Q02386 682 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 DOC2BQ14184 412 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 GGHQ92820 318 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 SERPINB11Q96P15 392 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 BOCQ9BWV1 1114 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 IL1RAPQ9NPH3 570 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 SERHLQ9NQF3 203 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 RLIMQ9NVW2 624 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.36
TRIM3-203ENST00000525074 KLHL20Q9Y2M5 609 aa12.77□□□□□ -0.36
TRIM3-203ENST00000525074 PLXNB2O15031 1838 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
TRIM3-203ENST00000525074 IL6P05231 212 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 HOXB8P17481 243 aaPredicted RBP12.77□□□□□ -0.37
TRIM3-203ENST00000525074 FPR1P21462 350 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 MRPL19P49406 292 aaKnown RBP12.77□□□□□ -0.37
TRIM3-203ENST00000525074 KCNQ1P51787 676 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 MXD1Q05195 221 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 ARHGEF7Q14155 803 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 CDK10Q15131 360 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 TSTQ16762 297 aaKnown RBP12.77□□□□□ -0.37
TRIM3-203ENST00000525074 PTCHD3Q3KNS1 767 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 CEP78Q5JTW2 689 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 SBSNQ6UWP8 590 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 SLC46A3Q7Z3Q1 461 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 UBQLNLQ8IYU4 475 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 TMEM132CQ8N3T6 1108 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 C1QTNF3Q9BXJ4 246 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 ARHGAP39Q9C0H5 1083 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 CLMPQ9H6B4 373 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 CCDC177Q9NQR7 707 aaPredicted RBP12.77□□□□□ -0.37
TRIM3-203ENST00000525074 OGDHLQ9ULD0 1010 aa12.77□□□□□ -0.37
TRIM3-203ENST00000525074 TAPBPO15533 448 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 ADORA3P0DMS8 318 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 PIK3CBP42338 1070 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 ELP6Q0PNE2 266 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 ST3GAL4Q11206 333 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 SERINC3Q13530 473 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 C10orf120Q5SQS8 335 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 CNPPD1Q9BV87 410 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 RPRD1BQ9NQG5 326 aaKnown RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 PRDM5Q9NQX1 630 aaPredicted RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 PPT2Q9UMR5 302 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 PCM1Q15154 2024 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 ZSWIM8A7E2V4 1837 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 ZSCAN5BA6NJL1 495 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 C2orf81A6NN90 581 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 HAS3O00219 553 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 STX7O15400 261 aaKnown RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 SCO2O43819 266 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 RRM2P31350 389 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 TNFSF8P32971 234 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 OR1E2P47887 323 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 TUFMP49411 452 aaKnown RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 CPT1AP50416 773 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 UGT2B15P54855 530 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 CXCR4P61073 352 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 SNRPD2P62316 118 aaKnown RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 GPLD1P80108 840 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 BAK1Q16611 211 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 USP39Q53GS9 565 aaKnown RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 PAF1Q8N7H5 531 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 TRPV1Q8NER1 839 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 KBTBD8Q8NFY9 601 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 LKAAEAR1Q8TD35 194 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 GPR151Q8TDV0 419 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
TRIM3-203ENST00000525074 MAGIXQ9H6Y5 334 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 CCSER2Q9H7U1 834 aa12.76□□□□□ -0.37
TRIM3-203ENST00000525074 TM9SF3Q9HD45 589 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms