RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ARF3P61204 181 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 FOXD4Q12950 439 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 SNTB1Q13884 538 aaKnown RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 GRB7Q14451 532 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 TAZQ16635 292 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CCSMST1Q4G0I0 132 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 FIGNQ5HY92 759 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 ACER2Q5QJU3 275 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 Q6ZPB1 254 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CD163Q86VB7 1156 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 VSIG1Q86XK7 387 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CRLF3Q8IUI8 442 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CCDC71Q8IV32 467 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 DCUN1D3Q8IWE4 304 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 KRT222Q8N1A0 295 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 GHDCQ8N2G8 530 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 LKAAEAR1Q8TD35 194 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 METTL21AQ8WXB1 218 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 FRMD6Q96NE9 622 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 SMR3AQ99954 134 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 MENTQ9BUN1 341 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 RNF32Q9H0A6 362 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 NPDC1Q9NQX5 325 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 SPTLC3Q9NUV7 552 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 NLE1Q9NVX2 485 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 CAPN11Q9UMQ6 739 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 NENFQ9UMX5 172 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 RUVBL1Q9Y265 456 aaKnown RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 ZNF469Q96JG9 3925 aaPredicted RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 AKAP6Q13023 2319 aa11.02□□□□□ -0.65
SDCBP-211ENST00000523441 FLNAP21333 2647 aaKnown RBP11.02□□□□□ -0.65
SDCBP-211ENST00000523441 hCG_1818297A0A087WSY0 165 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 A0A0U1RQJ8 604 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 CCDC162PA2VCL2 907 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 E9PLN8 166 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 ADAM10O14672 748 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 RPN2P04844 631 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 GSTM1P09488 218 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 ICAM2P13598 275 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 CCR7P32248 378 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 PTGER1P34995 402 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 GSTM4Q03013 218 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 MSLNQ13421 630 aaPredicted RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 DSG2Q14126 1118 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 SLC18A3Q16572 532 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 DNAJC21Q5F1R6 531 aaKnown RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 CES4AQ5XG92 561 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 DENND5AQ6IQ26 1287 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 LRRC8BQ6P9F7 803 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 TTC23LQ6PF05 361 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 DARS2Q6PI48 645 aaKnown RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 ZC3H7AQ8IWR0 971 aaKnown RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 SLC22A15Q8IZD6 547 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 CPSF7Q8N684 471 aaKnown RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 CSNK1A1LQ8N752 337 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 AMER3Q8N944 861 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 FAM98AQ8NCA5 519 aaKnown RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 ZUFSPQ96AP4 578 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 ZNF354BQ96LW1 612 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 ZNF285Q96NJ3 590 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 DMRTA2Q96SC8 542 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 VKORC1Q9BQB6 163 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 ANP32EQ9BTT0 268 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 DPH7Q9BTV6 452 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 TUBB6Q9BUF5 446 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 C14orf105Q9NVL8 296 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 DNAJB12Q9NXW2 375 aaKnown RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 TNFRSF10DQ9UBN6 386 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 TTC7AQ9ULT0 858 aaPredicted RBP11.01□□□□□ -0.65
SDCBP-211ENST00000523441 CDC14AQ9UNH5 594 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 NFS1Q9Y697 457 aa11.01□□□□□ -0.65
SDCBP-211ENST00000523441 IGLV3-12A0A075B6K2 115 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 GABRR3A8MPY1 467 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 HACD1B0YJ81 288 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 QSOX1O00391 747 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 PRPF4O43172 522 aaKnown RBP eCLIP11□□□□□ -0.65
SDCBP-211ENST00000523441 PDE9AO76083 593 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 STK10O94804 968 aaKnown RBP11□□□□□ -0.65
SDCBP-211ENST00000523441 GYPCP04921 128 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 ZNF24P17028 368 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 UBASH3AP57075 661 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 AP2B1P63010 937 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 LTBQ06643 244 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 RNFT1Q5M7Z0 435 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 LRRC38Q5VT99 294 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 SUSD1Q6UWL2 747 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 ADCK2Q7Z695 626 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 FGD2Q7Z6J4 655 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 LDB1Q86U70 411 aaPredicted RBP11□□□□□ -0.65
SDCBP-211ENST00000523441 RPRMLQ8N4K4 120 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 MARVELD2Q8N4S9 558 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 TMEM178AQ8NBL3 297 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 MDS2Q8NDY4 140 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 OR2L3Q8NG85 312 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 GSDMBQ8TAX9 411 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 PHF10Q8WUB8 498 aaKnown RBP11□□□□□ -0.65
SDCBP-211ENST00000523441 IMMP1LQ96LU5 166 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 ZFYVE21Q9BQ24 234 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 FERMT1Q9BQL6 677 aa11□□□□□ -0.65
SDCBP-211ENST00000523441 TRIM51Q9BSJ1 452 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms